AutismKB 2.0

Annotation Detail for NECAB1


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Basic Information Top
Gene Symbol:NECAB1 ( EFCBP1,STIP-1 )
Gene Full Name: N-terminal EF-hand calcium binding protein 1
Band: 8q21.3
Quick LinksEntrez ID:64168; OMIM: NA; Uniprot ID:NECA1_HUMAN; ENSEMBL ID: ENSG00000123119; HGNC ID: 20983
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022351
  • Location:chr8 91872953-92040804
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 91867220 91867476 256 5606
FOXA1 MCF7GSE15244 91853627 91853946 319 19167
FoxA1 MCF7MACSdata 91853585 91853966 381 19178
GATA3 MCF7GSE15244 91853560 91853946 386 19201
H3K27me3 colorectalcancer 91872207 91872803 596 449
RARA MCF7GSE15244 91852371 91853946 1575 19795
RARG MCF7GSE15244 91852575 91853946 1371 19693
TFAP2C MCF7GSE21234 91853509 91853968 459 19215
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Myc K562GSE19551 92055609 92056115 506 15058
RARA MCF7GSE15244 92054605 92054862 257 13929
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 92029720 92029940 220 0
CTCF CD4SISSRdata 92029720 92029940 220 0
CTCF G2GSE9613 91873061 91873383 322 0
CTCF G2GSE9613 92029757 92030145 388 0
ER MCF7GSE19013 91968760 91970208 1448 0
FOXA1 MCF7GSE15244 91911816 91912069 253 0
FOXA1 MCF7GSE15244 91923151 91923287 136 0
FOXA1 MCF7GSE15244 91958753 91959092 339 0
FOXA1 MCF7GSE15244 91963209 91963537 328 0
FOXA1 MCF7GSE15244 91969040 91969505 465 0
FOXA1 MCF7GSE15244 91994292 91994667 375 0
FOXA1 MCF7GSE15244 91995264 91996381 1117 0
FoxA1 MCF7MACSdata 91969122 91969424 302 0
GATA3 MCF7GSE15244 91968964 91970468 1504 0
GATA3 MCF7GSE15244 91994256 91994667 411 0
Myc hESGSE17917 91872944 91873321 377 0
Nanog hESGSE18292 92009188 92009634 446 0
Oct1 H2O2-HelaGSE14283 92018861 92018893 32 0
Oct1 HelaGSE14283 92017589 92017630 41 0
Oct4 hESGSE21916 92009164 92009665 501 0
RARA MCF7GSE15244 91956367 91956578 211 0
RARA MCF7GSE15244 91968888 91970504 1616 0
RARA MCF7GSE15244 91994180 91996422 2242 0
RARG MCF7GSE15244 91968928 91969560 632 0
RUNX JurkatGSE17954 91912518 91912611 93 0
TAF HelaGSE8489 91961519 91961658 139 0
hScc1 BcellGSE12603 91957456 91957605 149 0
hScc1 BcellGSE12603 92029840 92030033 193 0
hScc1 CdLSGSE12603 92029646 92030182 536 0
hScc1 G2GSE9613 92029646 92030439 793 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25689 mRNA EFCBP1 chr8 91872953 92040806 567 EST chr8 92039488 92052541Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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