Annotation Detail for SFRP1

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Basic Information Top

Gene Symbol:	SFRP1 ( FRP,FRP-1,FRP1,FrzA,SARP2 )
Gene Full Name:	secreted frizzled-related protein 1
Band:	8p11.21
Quick Links	Entrez ID:6422; OMIM: 604156; Uniprot ID:SFRP1_HUMAN; ENSEMBL ID: ENSG00000104332; HGNC ID: 10776
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
173	N-linked (GlcNAc...).

Location(AA)	Modifications	Resource
173	N-linked (GlcNAc...).	Swiss-Prot 53.0

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	41286773	41287341	568	921
CTCF	G2	GSE9613	41288066	41288357	291	2075
CTCF	G2	GSE9613	41300862	41301217	355	14903
CTCF	G2	GSE9613	41303938	41304083	145	17874
FOXA1	MCF7	GSE15244	41299798	41301145	1347	14335
H3K27me3	colorectal	cancer	41286262	41286474	212	232
H3K27me3	colorectal	cancer	41287373	41288950	1577	2025
Stat6	IL-4-hr4	GSE17850	41288366	41288919	553	2506
TFAP2C	MCF7	GSE21234	41299939	41300538	599	14102
hScc1	Bcell	GSE12603	41293106	41293251	145	7042

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	41224451	41224758	307	14031
CTCF	G2	GSE9613	41235968	41236096	128	2604
Rb	Growing	GSE19898	41221298	41221536	238	17219

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	41260807	41261656	849
CTCF	G2	GSE9613	41267179	41267484	305
CTCF	G2	GSE9613	41279228	41280164	936
CTCF	G2	GSE9613	41285282	41286289	1007
ER	E2-MCF7	GSE14664	41250821	41250861	40
FOXA1	MCF7	GSE15244	41272787	41273136	349
FOXA1	MCF7	GSE15244	41279946	41280200	254
Fos	K562	GSE19551	41254159	41254526	367
NRSF	pAb	Jurkat	41285621	41286223	602
RARG	MCF7	GSE15244	41279946	41280281	335
Stat6	IL-4-hr1	GSE17850	41278743	41279293	550
Stat6	IL-4-hr4	GSE17850	41253912	41254378	466
hScc1	Bcell	GSE12603	41265435	41265618	183
hScc1	Bcell	GSE12603	41279192	41280281	1089
hScc1	Bcell	GSE12603	41285104	41286116	1012
hScc1	CdLS	GSE12603	41240893	41241332	439
hScc1	CdLS	GSE12603	41279373	41280320	947
hScc1	CdLS	GSE12603	41285657	41286035	378
hScc1	G2	GSE9613	41279292	41280392	1100

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-141	hsa-mir-141	12	20420713
hsa-miR-141	hsa-mir-141	12	18698484
hsa-miR-141*	hsa-mir-141	12	20420713
hsa-miR-141*	hsa-mir-141	12	18698484
hsa-miR-142-3p	hsa-mir-142	17	20420713
hsa-miR-149	hsa-mir-149	2	20420713
hsa-miR-149*	hsa-mir-149	2	20420713
hsa-miR-185	hsa-mir-185	22	20420713
hsa-miR-185*	hsa-mir-185	22	20420713
hsa-miR-200a	hsa-mir-200a	1	18698484
hsa-miR-200a*	hsa-mir-200a	1	20420713
hsa-miR-200a*	hsa-mir-200a	1	18698484
hsa-miR-200b	hsa-mir-200b	1	18698484
hsa-miR-200b*	hsa-mir-200b	1	18698484
hsa-miR-200c	hsa-mir-200c	12	20420713
hsa-miR-200c	hsa-mir-200c	12	18698484
hsa-miR-200c*	hsa-mir-200c	12	20420713
hsa-miR-200c*	hsa-mir-200c	12	18698484
hsa-miR-205	hsa-mir-205	1	18698484
hsa-miR-21	hsa-mir-21	17	20420713
hsa-miR-21*	hsa-mir-21	17	20420713
hsa-miR-224	hsa-mir-224	X	20420713
hsa-miR-31	hsa-mir-31	9	21048943
hsa-miR-31*	hsa-mir-31	9	21048943
hsa-miR-34a	hsa-mir-34a	1	20420713
hsa-miR-34a*	hsa-mir-34a	1	20420713
hsa-miR-429	hsa-mir-429	1	18698484

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018