AutismKB 2.0

Annotation Detail for SRSF3


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Basic Information Top
Gene Symbol:SRSF3 ( SFRS3,SRp20 )
Gene Full Name: serine/arginine-rich splicing factor 3
Band: 6p21.31-p21.2
Quick LinksEntrez ID:6428; OMIM: 603364; Uniprot ID:SRSF3_HUMAN; ENSEMBL ID: ENSG00000112081; HGNC ID: 10785
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
5Phosphoserine.
23N6-acetyllysine.
81Phosphoserine.
95Phosphoserine.
108Phosphoserine.
138Phosphoserine.
140Phosphoserine.
148Phosphoserine.
150Phosphoserine.
152Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003017
  • Location:chr6 36670143-36679186
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 36655466 36655710 244 14556
CTCF CD4SISSRdata 36655466 36655710 244 14556
CTCF G2GSE9613 36655344 36655709 365 14617
CTCF G2GSE9613 36669836 36670385 549 33
Fos K562GSE19551 36669262 36670581 1319 222
H3ac HepG2E 36653718 36653934 216 16318
Nanog hESGSE18292 36655465 36655667 202 14578
Oct1 H2O2-HelaGSE14283 36669038 36669085 47 1082
Oct1 HelaGSE14283 36669039 36669068 29 1090
P300 T0-glioblastomaGSE21026 36669664 36670540 876 42
PHF8 293TGSE20725 36669510 36670554 1044 112
TAF k562GSE8489 36666853 36667055 202 3190
USF2 HepG2E 36669305 36670800 1495 91
hScc1 BcellGSE12603 36655344 36655565 221 14689
hScc1 CdLSGSE12603 36655344 36655672 328 14636
p130 SenescentGSE19898 36669724 36670553 829 5
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 36690932 36691246 314 11903
CTCF CD4SISSRdata 36690932 36691246 314 11903
CTCF G2GSE9613 36694150 36694376 226 15077
FOXA1 MCF7GSE15244 36692602 36693232 630 13731
FoxA1 MCF7MACSdata 36692767 36693063 296 13729
H3ac HepG2E 36683399 36683704 305 4365
RARA MCF7GSE15244 36692292 36693449 1157 13684
RARG MCF7GSE15244 36692396 36693413 1017 13718
TFAP2C MCF7GSE21234 36692401 36693366 965 13697
hScc1 G2GSE9613 36698732 36699631 899 19995
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 36670341 36670981 640 0
H3ac HepG2E 36669305 36671094 1789 0
H3ac HepG2E 36672024 36672827 803 0
H3ac HepG2E 36673173 36674047 874 0
H3ac HepG2E 36674447 36675474 1027 0
P300 T30-glioblastomaGSE21026 36669301 36671801 2500 0
PHF8 Hs68minusFBSGSE20725 36669722 36670653 931 0
PHF8 Hs68plusFBSGSE20725 36669686 36670963 1277 0
TAF HelaGSE8489 36670013 36671094 1081 0
TAF k562GSE8489 36669305 36671094 1789 0
TAF k562GSE8489 36672024 36672827 803 0
TAF k562GSE8489 36677560 36678265 705 0
USF1 HepG2E 36669305 36671094 1789 0
USF1 HepG2E 36674447 36676669 2222 0
USF2 HepG2E 36674447 36676559 2112 0
hScc1 BcellGSE12603 36670013 36670312 299 0
p130 shRbQuiescentGSE19898 36669771 36670932 1161 0
p130 shRbSenescentGSE19898 36669645 36670785 1140 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
22522 mRNA SFRS3 chr6 36670143 36679187 720 EST chr6 36678059 36678779Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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