AutismKB 2.0

Annotation Detail for PAPD5


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Basic Information Top
Gene Symbol:PAPD5 ( FLJ40270,TRF4-2 )
Gene Full Name: PAP associated domain containing 5
Band: 16q12.1
Quick LinksEntrez ID:64282; OMIM: 605540; Uniprot ID:PAPD5_HUMAN; ENSEMBL ID: ENSG00000121274; HGNC ID: 30758
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
484Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
45O-linkedHMM predict
45Phosphoserine(PKA)HMM predict
45Phosphoserine(IKK)HMM predict
46O-linkedHMM predict
48O-linkedHMM predict
49Phosphoserine(ATM)HMM predict
49Phosphoserine(CDC2)HMM predict
55Phosphoserine(CK1)HMM predict
56Phosphoserine(ATM)HMM predict
56Phosphoserine(CDC2)HMM predict
60O-linkedHMM predict
71O-linkedHMM predict
73Phosphoserine(IKK)HMM predict
103Phosphotyrosine(Abl)HMM predict
103Phosphotyrosine(Jak)HMM predict
130SulfotyrosineHMM predict
130Phosphotyrosine(INSR)HMM predict
166Phosphoserine(CDK)HMM predict
208Phosphoserine(CK1)HMM predict
259Phosphotyrosine(Jak)HMM predict
375Phosphotyrosine(INSR)HMM predict
405N-linkedHMM predict
447O-linkedHMM predict
448O-linkedHMM predict
449Phosphoserine(IKK)HMM predict
450O-linkedHMM predict
450Phosphoserine(CK1)HMM predict
452O-linkedHMM predict
454Phosphoserine(IKK)HMM predict
457Phosphoserine(ATM)HMM predict
457Phosphoserine(CK1)HMM predict
464Phosphothreonine(MAPK)HMM predict
484Phosphoserine(PKA)HMM predict
488Phosphoserine(IKK)HMM predict
492Phosphoserine(ATM)HMM predict
508N-linkedHMM predict
511N-linkedHMM predict
523Phosphoserine(CDC2)HMM predict
524Phosphoserine(PKC)HMM predict
524Phosphoserine(PKA)HMM predict
560LysineHMM predict
566ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001040284
  • Location:chr16 48745568-48826717
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 48744261 48744525 264 1176
CTCF G2GSE9613 48745279 48745748 469 55
KLF4 hESGSE17917 48744368 48744925 557 922
NRSF mAbJurkat 48744261 48744525 264 1176
Oct1 H2O2-HelaGSE14283 48736300 48736332 32 9253
Oct1 H2O2-HelaGSE14283 48742253 48742294 41 3295
Oct1 H2O2-HelaGSE14283 48742416 48742451 35 3135
Oct1 HelaGSE14283 48736302 48736331 29 9252
Oct1 HelaGSE14283 48742253 48742295 42 3295
Oct1 HelaGSE14283 48742415 48742451 36 3136
PHF8 293TGSE20725 48743729 48744649 920 1380
PHF8 HeLaGSE20725 48743775 48745025 1250 1169
PHF8 Hs68minusFBSGSE20725 48744046 48744906 860 1093
PHF8 Hs68plusFBSGSE20725 48743845 48744696 851 1298
PolII HeLaGSE12783 48743578 48745964 2386 798
hScc1 BcellGSE12603 48743863 48744525 662 1375
p130 SenescentGSE19898 48744219 48744518 299 1200
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 48837753 48838091 338 11205
Fos K562GSE19551 48836569 48837249 680 10192
Rb shRbSenescenceGSE19898 48832863 48833083 220 6256
hScc1 BcellGSE12603 48837110 48837516 406 10596
hScc1 CdLSGSE12603 48837197 48837906 709 10834
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 48796808 48797139 331 0
CBP T30-glioblastomaGSE21026 48794030 48795267 1237 0
CTCF CD4GSE12889 48801999 48802279 280 0
CTCF CD4GSE12889 48805385 48805709 324 0
CTCF CD4SISSRdata 48801999 48802279 280 0
CTCF CD4SISSRdata 48805385 48805709 324 0
CTCF G2GSE9613 48801803 48802317 514 0
H3ac HepG2E 48745882 48747731 1849 0
H3ac HepG2E 48750003 48750569 566 0
NRSF mAbJurkat 48746236 48747291 1055 0
NRSF-poly JurkatQuESTdata 48746949 48747325 376 0
Oct1 H2O2-HelaGSE14283 48782018 48782060 42 0
Oct1 H2O2-HelaGSE14283 48826223 48826265 42 0
Oct1 HelaGSE14283 48748439 48748478 39 0
Oct1 HelaGSE14283 48782019 48782078 59 0
Oct1 HelaGSE14283 48817272 48817300 28 0
Oct1 HelaGSE14283 48826223 48826264 41 0
P300 T0-glioblastomaGSE21026 48746822 48747591 769 0
P300 T30-glioblastomaGSE21026 48794062 48795598 1536 0
TAF HelaGSE8489 48746236 48746759 523 0
TFAP2C MCF7GSE21234 48801347 48801688 341 0
hScc1 BcellGSE12603 48801554 48802383 829 0
hScc1 BcellGSE12603 48805401 48805735 334 0
hScc1 CdLSGSE12603 48801434 48802457 1023 0
hScc1 CdLSGSE12603 48805401 48805735 334 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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