AutismKB 2.0

Annotation Detail for SRSF6


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Basic Information Top
Gene Symbol:SRSF6 ( B52,FLJ08061,MGC5045,SFRS6,SRP55 )
Gene Full Name: serine/arginine-rich splicing factor 6
Band: 20q13.11
Quick LinksEntrez ID:6431; OMIM: 601944; Uniprot ID:SRSF6_HUMAN; ENSEMBL ID: ENSG00000124193; HGNC ID: 10788
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
45Phosphoserine.
101N6-acetyllysine.
259Phosphoserine.
297Phosphoserine.
299Phosphoserine.
301Phosphoserine.
303Phosphoserine.
314Phosphoserine.
316Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006275
  • Location:chr20 41519931-41525654
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 41510979 41511390 411 8747
CTCF CD4SISSRdata 41510979 41511390 411 8747
CTCF G2GSE9613 41511164 41511353 189 8673
E2F4 SGSE7516 41519325 41520042 717 248
Fos K562GSE19551 41519163 41520205 1042 248
H3ac HepG2E 41518723 41519775 1052 683
LIN9 G0GSE7516 41518973 41520183 1210 354
LIN9 SGSE7516 41518862 41520084 1222 459
PHF8 Hs68plusFBSGSE20725 41519002 41520721 1719 70
TAF HelaGSE8489 41518723 41519909 1186 616
hScc1 BcellGSE12603 41511164 41511353 189 8673
hScc1 CdLSGSE12603 41511164 41511353 189 8673
hScc1 G2GSE9613 41511164 41511353 189 8673
p130 G0GSE7516 41519114 41519669 555 540
p130 SGSE7516 41519114 41520183 1069 283
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
STAT1 HeLaGSE12783 41526726 41530179 3453 2798
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 41519862 41520281 419 0
H3ac HepG2E 41520692 41522235 1543 0
Myc hESGSE17917 41520258 41520462 204 0
PHF8 HeLaGSE20725 41519016 41520889 1873 0
PHF8 Hs68minusFBSGSE20725 41519565 41520634 1069 0
hScc1 BcellGSE12603 41520213 41520717 504 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
16385 mRNA SFRS6 chr20 41519931 41525655 585 EST chr20 41523403 41523988Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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