Annotation Detail for LMBR1
Basic Information Top
| Gene Symbol: | LMBR1 ( ACHP,C7orf2,DIF14,FLJ11665,PPD2,TPT ) |
|---|---|
| Gene Full Name: | limb region 1 homolog (mouse) |
| Band: | 7q36.3 |
| Quick Links | Entrez ID:64327; OMIM: 605522; Uniprot ID:LMBR1_HUMAN; ENSEMBL ID: ENSG00000105983; HGNC ID: 13243 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | Phosphoserine(CK2) | HMM predict |
| 96 | Sulfotyrosine | HMM predict |
| 101 | N-linked | HMM predict |
| 183 | Sulfotyrosine | HMM predict |
| 257 | Phosphoserine(ATM) | HMM predict |
| 337 | N-linked | HMM predict |
| 374 | N-linked | HMM predict |
| 451 | Phosphothreonine(PKA) | HMM predict |
| 452 | Phosphoserine(PKA) | HMM predict |
| 452 | Phosphoserine(PKA) | HMM predict |
| 471 | N-linked | HMM predict |
- RefSeq ID: NM_022458
- Location:chr7 156168394-156378601
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 156394379 | 156394683 | 304 | 15930 |
| CTCF | CD4 | SISSRdata | 156394379 | 156394683 | 304 | 15930 |
| CTCF | G2 | GSE9613 | 156394252 | 156394540 | 288 | 15795 |
| ER | MCF7 | GSE19013 | 156378586 | 156379190 | 604 | 287 |
| H3K4me3 | colorectal | cancer | 156379192 | 156379532 | 340 | 761 |
| Myc | K562 | GSE19551 | 156394326 | 156394796 | 470 | 15960 |
| PHF8 | 293T | GSE20725 | 156377998 | 156379405 | 1407 | 100 |
| PHF8 | HeLa | GSE20725 | 156378179 | 156379439 | 1260 | 208 |
| PHF8 | Hs68minusFBS | GSE20725 | 156378759 | 156379491 | 732 | 524 |
| TAF | Hela | GSE8489 | 156379299 | 156379532 | 233 | 814 |
| TFAP2C | MCF7 | GSE21234 | 156392546 | 156392946 | 400 | 14145 |
| hScc1 | Bcell | GSE12603 | 156394252 | 156394782 | 530 | 15916 |
| hScc1 | CdLS | GSE12603 | 156394252 | 156394782 | 530 | 15916 |
| p130 | Quiescent | GSE19898 | 156378807 | 156379257 | 450 | 431 |
| p130 | shRbQuiescent | GSE19898 | 156378608 | 156379044 | 436 | 225 |
| p130 | shRbSenescent | GSE19898 | 156378668 | 156378817 | 149 | 141 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 156377720 | 156378741 | 1021 | 0 |
| ER | MCF7 | GSE19013 | 156231863 | 156232651 | 788 | 0 |
| ER | MCF7 | GSE19013 | 156232886 | 156233895 | 1009 | 0 |
| FOXA1 | MCF7 | GSE15244 | 156210515 | 156211228 | 713 | 0 |
| FOXA1 | MCF7 | GSE15244 | 156233155 | 156233681 | 526 | 0 |
| FoxA1 | MCF7 | MACSdata | 156233113 | 156233650 | 537 | 0 |
| FoxA1 | MCF7 | MACSdata | 156332929 | 156333150 | 221 | 0 |
| GABP | k562 | GSE8489 | 156354506 | 156354899 | 393 | 0 |
| H3K4me3 | colorectal | cancer | 156377140 | 156377845 | 705 | 0 |
| Myc | K562 | GSE19551 | 156249432 | 156249885 | 453 | 0 |
| NRSF | Jurkat | SISSRdata | 156249552 | 156249773 | 221 | 0 |
| Oct4 | hES | GSE21916 | 156276434 | 156277105 | 671 | 0 |
| Sox2 | hES | GSE18292 | 156351846 | 156352061 | 215 | 0 |
| TAF | Hela | GSE8489 | 156242570 | 156242909 | 339 | 0 |
| TAF | Hela | GSE8489 | 156321168 | 156321499 | 331 | 0 |
| TAF | Hela | GSE8489 | 156377140 | 156377617 | 477 | 0 |
| TFAP2C | MCF7 | GSE21234 | 156315075 | 156315631 | 556 | 0 |
| hScc1 | Bcell | GSE12603 | 156302258 | 156302877 | 619 | 0 |
| hScc1 | CdLS | GSE12603 | 156302144 | 156303087 | 943 | 0 |
| hScc1 | G2 | GSE9613 | 156377823 | 156378558 | 735 | 0 |
| p130 | shRbQuiescent | GSE19898 | 156236741 | 156237208 | 467 | 0 |
| p130 | shRbSenescent | GSE19898 | 156236823 | 156237116 | 293 | 0 |
Validated miRNA targets