AutismKB 2.0

Annotation Detail for CDH22


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Basic Information Top
Gene Symbol:CDH22 ( C20orf25,MGC39564,dJ998H6.1 )
Gene Full Name: cadherin 22, type 2
Band: 20q13.12
Quick LinksEntrez ID:64405; OMIM: 609920; Uniprot ID:CAD22_HUMAN; ENSEMBL ID: ENSG00000149654; HGNC ID: 13251
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
162N-linked (GlcNAc...) (Potential).
466N-linked (GlcNAc...) (Potential).
612N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
162N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
466N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
612N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
8MethylarginineHMM predict
41Phosphothreonine(CDK)HMM predict
41Phosphothreonine(MAPK)HMM predict
43Phosphoserine(IKK)HMM predict
43Phosphoserine(CDC2)HMM predict
43O-linkedHMM predict
45O-linkedHMM predict
88Phosphoserine(CK2)HMM predict
144Phosphothreonine(PKA)HMM predict
162N-linkedHMM predict
200Phosphotyrosine(INSR)HMM predict
202Phosphoserine(CDC2)HMM predict
237Phosphoserine(CK1)HMM predict
241Phosphotyrosine(Syk)HMM predict
258O-linkedHMM predict
262O-linkedHMM predict
264O-linkedHMM predict
320Phosphoserine(CK1)HMM predict
321Phosphoserine(CK1)HMM predict
322Phosphoserine(CK1)HMM predict
328MethyllysineHMM predict
350Phosphoserine(ATM)HMM predict
436Phosphoserine(CK2)HMM predict
588O-linkedHMM predict
590O-linkedHMM predict
591O-linkedHMM predict
591O-linkedHMM predict
592O-linkedHMM predict
612N-linkedHMM predict
623Phosphoserine(MAPK)HMM predict
656Phosphoserine(CK2)HMM predict
683Phosphotyrosine(Syk)HMM predict
732Phosphoserine(CK1)HMM predict
739Phosphoserine(MAPK)HMM predict
739Phosphoserine(CDC2)HMM predict
739Phosphoserine(ATM)HMM predict
780Phosphoserine(CDC2)HMM predict
780Phosphoserine(IKK)HMM predict
787Phosphoserine(CK1)HMM predict
790Phosphoserine(IKK)HMM predict
790Phosphoserine(CK1)HMM predict
793Phosphoserine(CK1)HMM predict
793Phosphoserine(CK2)HMM predict
820ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021248
  • Location:chr20 44235782-44313740
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 44314634 44315475 841 1314
H3K27me3 colorectalcancer 44319438 44320180 742 6069
NRSF JurkatGSE13047 44323769 44324519 750 10404
NRSF mAbJurkat 44319362 44320216 854 6049
NRSF mAbJurkat 44321070 44321918 848 7754
NRSF mAbJurkat 44323791 44326387 2596 11349
NRSF-mono JurkatQuESTdata 44323768 44324488 720 10388
NRSF-poly JurkatQuESTdata 44323801 44324490 689 10405
TFAP2C MCF7GSE21234 44317290 44317988 698 3899
hScc1 BcellGSE12603 44313899 44314384 485 401
hScc1 BcellGSE12603 44323447 44323682 235 9824
hScc1 BcellGSE12603 44326782 44327243 461 13272
hScc1 BcellGSE12603 44328859 44329006 147 15192
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 44231742 44232311 569 3756
hScc1 BcellGSE12603 44219630 44220013 383 15961
p63 keratinocytesGSE17611 44230963 44231940 977 4331
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 44236598 44236857 259 0
CTCF CD4SISSRdata 44236598 44236857 259 0
CTCF JurkatGSE12889 44236603 44236846 243 0
Fos K562GSE19551 44267995 44268611 616 0
Fos K562GSE19551 44277824 44278424 600 0
Gata1 K562GSE18868 44277765 44278276 511 0
Gata2 K562GSE18868 44277812 44278511 699 0
H3K27me3 colorectalcancer 44311514 44312979 1465 0
Myc hESGSE17917 44236584 44236942 358 0
NRSF JurkatGSE13047 44290918 44294185 3267 0
NRSF mAbJurkat 44280412 44281296 884 0
NRSF mAbJurkat 44286214 44287090 876 0
NRSF mAbJurkat 44287812 44288252 440 0
NRSF mAbJurkat 44288625 44289359 734 0
NRSF mAbJurkat 44290826 44291224 398 0
NRSF mAbJurkat 44291734 44292325 591 0
NRSF mAbJurkat 44292977 44293330 353 0
NRSF mAbJurkat 44293751 44296131 2380 0
NRSF mAbJurkat 44296603 44298435 1832 0
NRSF mAbJurkat 44300097 44301240 1143 0
NRSF-mono JurkatQuESTdata 44291051 44292156 1105 0
NRSF-mono JurkatQuESTdata 44292189 44294184 1995 0
NRSF-mono JurkatQuESTdata 44313495 44313721 226 0
NRSF-poly JurkatQuESTdata 44290681 44292699 2018 0
NRSF-poly JurkatQuESTdata 44292732 44294148 1416 0
P300 T30-glioblastomaGSE21026 44277506 44278683 1177 0
TFAP2C MCF7GSE21234 44277869 44278442 573 0
hScc1 BcellGSE12603 44236147 44237059 912 0
hScc1 BcellGSE12603 44241209 44242059 850 0
hScc1 BcellGSE12603 44255537 44256178 641 0
hScc1 BcellGSE12603 44290286 44290476 190 0
hScc1 BcellGSE12603 44290970 44291224 254 0
hScc1 BcellGSE12603 44313085 44313400 315 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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