Annotation Detail for SFTPD
Basic Information Top
| Gene Symbol: | SFTPD ( COLEC7,PSP-D,SFTP4,SP-D ) |
|---|---|
| Gene Full Name: | surfactant protein D |
| Band: | 10q22.3 |
| Quick Links | Entrez ID:6441; OMIM: 178635; Uniprot ID:SFTPD_HUMAN; ENSEMBL ID: ENSG00000133661; HGNC ID: 10803 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 78 | 4-hydroxyproline (By similarity). | |
| 87 | 5-hydroxylysine (By similarity). | |
| 90 | N-linked (GlcNAc...) (Potential). | |
| 96 | 4-hydroxyproline (By similarity). | |
| 99 | 5-hydroxylysine (By similarity). | |
| 171 | 4-hydroxyproline (By similarity). | |
| 177 | 4-hydroxyproline (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 78 | Hydroxyproline (By similarity). | Swiss-Prot 53.0 |
| 87 | 5-hydroxylysine (By similarity). | Swiss-Prot 53.0 |
| 90 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 96 | Hydroxyproline (By similarity). | Swiss-Prot 53.0 |
| 99 | 5-hydroxylysine (By similarity). | Swiss-Prot 53.0 |
| 171 | Hydroxyproline (By similarity). | Swiss-Prot 53.0 |
| 177 | Hydroxyproline (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 63 | O-linked | HMM predict |
| 87 | O-linked | HMM predict |
| 99 | O-linked | HMM predict |
| 102 | O-linked | HMM predict |
| 105 | O-linked | HMM predict |
| 119 | Methylarginine | HMM predict |
| 138 | O-linked | HMM predict |
| 144 | O-linked | HMM predict |
| 159 | Methylarginine | HMM predict |
| 165 | O-linked | HMM predict |
| 198 | Methylarginine | HMM predict |
| 204 | O-linked | HMM predict |
| 207 | O-linked | HMM predict |
| 213 | O-linked | HMM predict |
| 216 | O-linked | HMM predict |
| 219 | O-linked | HMM predict |
| 246 | Phosphoserine(ATM) | HMM predict |
| 248 | Phosphotyrosine(Syk) | HMM predict |
| 290 | Phosphoserine(CDC2) | HMM predict |
| 293 | Phosphoserine(IKK) | HMM predict |
| 365 | S-farnesyl | HMM predict |
- RefSeq ID: NM_003019
- Location:chr10 81687477-81698840
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 81711007 | 81711040 | 33 | 12183 |
| Oct1 | H2O2-Hela | GSE14283 | 81710657 | 81710685 | 28 | 11831 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 81679205 | 81679482 | 277 | 8134 |
| CTCF | CD4 | SISSRdata | 81679205 | 81679482 | 277 | 8134 |
| CTCF | Jurkat | GSE12889 | 81679140 | 81679562 | 422 | 8127 |
| FoxA1 | MCF7 | MACSdata | 81683845 | 81683956 | 111 | 3577 |
| Myc | K562 | GSE19551 | 81679139 | 81679595 | 456 | 8111 |
| hScc1 | Bcell | GSE12603 | 81679129 | 81679752 | 623 | 8037 |
| hScc1 | CdLS | GSE12603 | 81679129 | 81679606 | 477 | 8110 |
| hScc1 | G2 | GSE9613 | 81679129 | 81679570 | 441 | 8128 |
| No data |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3366 | EST | chr10 | 81681446 | 81700072 | 78 | mRNA | SFTPD | chr10 | 81687477 | 81698841 | Sense/Antisense (SA) pairs | |