Annotation Detail for SH3GL1
Basic Information Top
| Gene Symbol: | SH3GL1 ( CNSA1,EEN,MGC111371,SH3D2B,SH3P8 ) |
|---|---|
| Gene Full Name: | SH3-domain GRB2-like 1 |
| Band: | 19p13.3 |
| Quick Links | Entrez ID:6455; OMIM: 601768; Uniprot ID:SH3G1_HUMAN; ENSEMBL ID: ENSG00000141985; HGNC ID: 10830 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 287 | Phosphoserine. | |
| 288 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 288 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 315 | Phosphotyrosine (FAK;Src) | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 86 | Phosphotyrosine(EGFR) | HMM predict |
| 170 | Phosphotyrosine(Jak) | HMM predict |
| 278 | O-linked | HMM predict |
| 288 | Phosphoserine(IKK) | HMM predict |
| 291 | Phosphoserine(CDC2) | HMM predict |
| 298 | Phosphothreonine(MAPK) | HMM predict |
| 298 | Phosphothreonine(CDK) | HMM predict |
| 344 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_003025
- Location:chr19 4311367-4351470
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 4351176 | 4351865 | 689 | 50 |
| ETS1 | Jurkat | GSE17954 | 4351084 | 4351910 | 826 | 27 |
| VDR | GM10861-stim | GSE22484 | 4351034 | 4352371 | 1337 | 232 |
| hScc1 | CdLS | GSE12603 | 4351141 | 4351865 | 724 | 33 |
| p130 | Quiescent | GSE19898 | 4351590 | 4351919 | 329 | 284 |
| p130 | Senescent | GSE19898 | 4351601 | 4351906 | 305 | 283 |
| p130 | shRbQuiescent | GSE19898 | 4351614 | 4351914 | 300 | 294 |
| p130 | shRbSenescent | GSE19898 | 4351614 | 4351974 | 360 | 324 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 4320998 | 4321326 | 328 | 0 |
| CTCF | CD4 | SISSRdata | 4320998 | 4321326 | 328 | 0 |
| ER | E2-MCF7 | GSE14664 | 4312014 | 4312048 | 34 | 0 |
| ER | E2-MCF7 | GSE14664 | 4332899 | 4332954 | 55 | 0 |
| ER | E2-MCF7 | GSE14664 | 4333870 | 4333949 | 79 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 4333893 | 4333970 | 77 | 0 |
| H3K4me3 | colorectal | cancer | 4350684 | 4350868 | 184 | 0 |
| H3ac | HepG2 | E | 4350684 | 4351069 | 385 | 0 |
| Nanog | hES | GSE18292 | 4341591 | 4341778 | 187 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 4319882 | 4319911 | 29 | 0 |
| Oct1 | Hela | GSE14283 | 4339943 | 4339973 | 30 | 0 |
| PHF8 | HeLa | GSE20725 | 4350833 | 4351808 | 975 | 0 |
| RARA | MCF7 | GSE15244 | 4326003 | 4327316 | 1313 | 0 |
| TAF | Hela | GSE8489 | 4344855 | 4345074 | 219 | 0 |
| TFAP2C | MCF7 | GSE21234 | 4325211 | 4327580 | 2369 | 0 |
| TFAP2C | MCF7 | GSE21234 | 4330269 | 4331071 | 802 | 0 |
| TFAP2C | MCF7 | GSE21234 | 4339545 | 4340209 | 664 | 0 |
| USF1 | HepG2 | E | 4341604 | 4342810 | 1206 | 0 |
| USF2 | HepG2 | E | 4342118 | 4342655 | 537 | 0 |
| hScc1 | Bcell | GSE12603 | 4312521 | 4313220 | 699 | 0 |
| hScc1 | Bcell | GSE12603 | 4320344 | 4321423 | 1079 | 0 |
| hScc1 | Bcell | GSE12603 | 4339705 | 4340386 | 681 | 0 |
| hScc1 | Bcell | GSE12603 | 4351176 | 4351665 | 489 | 0 |
| p130 | shRbSenescent | GSE19898 | 4325901 | 4326188 | 287 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12526 | EST | chr19 | 4314785 | 4315318 | 194 | mRNA | SH3GL1 | chr19 | 4311367 | 4351471 | Sense/Antisense (SA) pairs | |