AutismKB 2.0

Annotation Detail for ACBD3


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Basic Information Top
Gene Symbol:ACBD3 ( GCP60,GOCAP1,GOLPH1,PAP7 )
Gene Full Name: acyl-CoA binding domain containing 3
Band: 1q42.12
Quick LinksEntrez ID:64746; OMIM: 606809; Uniprot ID:GCP60_HUMAN; ENSEMBL ID: ENSG00000182827; HGNC ID: 15453
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
43Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
20Phosphoserine(MAPK)HMM predict
20Phosphoserine(ATM)HMM predict
20Phosphoserine(CDC2)HMM predict
43Phosphoserine(CDC2)HMM predict
43Phosphoserine(ATM)HMM predict
43O-linkedHMM predict
47O-linkedHMM predict
47O-linkedHMM predict
54O-linkedHMM predict
168S-palmitoylHMM predict
169S-palmitoylHMM predict
261Phosphotyrosine(Syk)HMM predict
285SulfotyrosineHMM predict
315O-linkedHMM predict
316O-linkedHMM predict
319O-linkedHMM predict
320O-linkedHMM predict
324N-linkedHMM predict
330N-linkedHMM predict
393Phosphoserine(CK1)HMM predict
404Phosphothreonine(PKC)HMM predict
415SulfotyrosineHMM predict
448Phosphoserine(CK2)HMM predict
450Phosphoserine(CK2)HMM predict
451Phosphoserine(CK2)HMM predict
521Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022735
  • Location:chr1 224399004-224441045
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 224451374 224451573 199 10428
CTCF CD4SISSRdata 224451374 224451573 199 10428
CTCF HelaGSE12889 224451368 224451589 221 10433
CTCF JurkatGSE12889 224451308 224451593 285 10405
CTCF G2GSE9613 224451289 224451626 337 10412
CTCF G2GSE9613 224455230 224455503 273 14321
Myc K562GSE19551 224451287 224451614 327 10405
PHF8 HeLaGSE20725 224440532 224441929 1397 185
PHF8 Hs68minusFBSGSE20725 224440508 224441614 1106 16
TAFII hESGSE17917 224440897 224441612 715 209
TFAP2C MCF7GSE21234 224449299 224449990 691 8599
hScc1 BcellGSE12603 224440733 224441436 703 39
hScc1 BcellGSE12603 224455230 224455613 383 14376
hScc1 CdLSGSE12603 224451289 224451626 337 10412
hScc1 CdLSGSE12603 224455341 224455613 272 14432
p130 QuiescentGSE19898 224440901 224441601 700 206
p130 shRbQuiescentGSE19898 224440930 224441672 742 256
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 224379496 224379873 377 19320
CTCF CD4SISSRdata 224379496 224379873 377 19320
CTCF G2GSE9613 224379373 224380220 847 19208
CTCF G2GSE9613 224382929 224383432 503 15824
CTCF G2GSE9613 224386565 224386736 171 12354
CTCF G2GSE9613 224388271 224388797 526 10471
H3ac HepG2E 224388455 224388843 388 10356
Rb GrowingGSE19898 224383070 224383234 164 15853
hScc1 BcellGSE12603 224379409 224380220 811 19190
hScc1 CdLSGSE12603 224379298 224380078 780 19317
hScc1 G2GSE9613 224379373 224380220 847 19208
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 224440585 224441367 782 0
ETS1 JurkatGSE17954 224440311 224441515 1204 0
GABP k562GSE8489 224439253 224440315 1062 0
H3K4me3 colorectalcancer 224439323 224440621 1298 0
H3ac HepG2E 224439515 224439726 211 0
PHF8 293TGSE20725 224440237 224441749 1512 0
TAF k562GSE8489 224439294 224440292 998 0
TFAP2C MCF7GSE21234 224436336 224436845 509 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2423 EST chr1 222642438 222649464 187 mRNA ACBD3 chr1 222639116 222681158Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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