Annotation Detail for C11orf1

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Basic Information Top

Gene Symbol:	C11orf1 ( FLJ23499 )
Gene Full Name:	chromosome 11 open reading frame 1
Band:	11q23.1
Quick Links	Entrez ID:64776; OMIM: NA; Uniprot ID:CK001_HUMAN; ENSEMBL ID: ENSG00000137720; HGNC ID: 1163
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:8 results

No data

Location(AA)	Modification	Resource
8	S-palmitoyl	HMM predict
9	S-palmitoyl	HMM predict
66	N-linked	HMM predict
72	N-linked	HMM predict
91	Phosphoserine(ATM)	HMM predict
135	Tyrosine	HMM predict
137	Cysteine	HMM predict
143	Phosphotyrosine(INSR)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_022761
Location:chr11 111255474-111261907
strand:+

Upstream the gene:13 results
Downstream the gene:1 results
Inside the gene:0 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T30-glioblastoma	GSE21026	111254246	111255965	1719	369
CTCF	CD4	GSE12889	111254815	111255186	371	474
CTCF	CD4	SISSRdata	111254815	111255186	371	474
FOXA1	MCF7	GSE15244	111254543	111255623	1080	392
H3K4me3	colorectal	cancer	111254237	111254835	598	939
H3ac	HepG2	E	111254276	111255968	1692	353
Oct4	hES	GSE17917	111255018	111255429	411	251
P300	T30-glioblastoma	GSE21026	111254161	111256037	1876	376
RARA	MCF7	GSE15244	111254506	111255883	1377	280
RARG	MCF7	GSE15244	111254543	111255848	1305	279
hScc1	Bcell	GSE12603	111254580	111255772	1192	299
hScc1	CdLS	GSE12603	111254543	111255968	1425	219
hScc1	G2	GSE9613	111254543	111255243	700	582

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
GABP	Hela	GSE8489	111265091	111265305	214	3291

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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