AutismKB 2.0

Annotation Detail for CRTC3


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Basic Information Top
Gene Symbol:CRTC3 ( FLJ21868,TORC3 )
Gene Full Name: CREB regulated transcription coactivator 3
Band: 15q26.1
Quick LinksEntrez ID:64784; OMIM: 608986; Uniprot ID:CRTC3_HUMAN; ENSEMBL ID: ENSG00000140577; HGNC ID: 26148
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
4Phosphoserine.
62Phosphoserine (By similarity).
129Phosphoserine (By similarity).
160Phosphothreonine (By similarity).
162Phosphoserine; by SNF1LK2 (By
168Phosphothreonine (By similarity).
305Phosphoserine (By similarity).
329Phosphoserine.
370Phosphoserine.
391Phosphoserine.
396Phosphoserine.
410Phosphoserine (By similarity).
443Phosphoserine.
543Phosphoserine (By similarity).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001042574
  • Location:chr15 88874201-88989579
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 88873741 88874606 865 28
Fos K562GSE19551 88866454 88866809 355 7570
PHF8 293TGSE20725 88873415 88874983 1568 3
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 88992367 88992707 340 2958
CTCF CD4SISSRdata 88992367 88992707 340 2958
CTCF G2GSE9613 88989917 88990457 540 608
CTCF G2GSE9613 88992376 88992617 241 2917
Oct1 HelaGSE14283 88998827 88998872 45 9270
P300 T30-glioblastomaGSE21026 89004333 89005812 1479 15493
RUNX JurkatGSE17954 89002412 89002552 140 12903
Rb GrowingGSE19898 88992721 88993047 326 3305
Rb SenescentGSE19898 88992671 88992998 327 3255
STAT1 HeLaGSE12782 88991948 88996170 4222 4480
STAT1 HeLaGSE12783 88991948 88996145 4197 4467
TFAP2C MCF7GSE21234 89004566 89005386 820 15397
hScc1 BcellGSE12603 88989949 88991237 1288 1014
hScc1 BcellGSE12603 88992376 88992617 241 2917
hScc1 BcellGSE12603 88998475 88998791 316 9054
hScc1 BcellGSE12603 89005069 89005605 536 15758
hScc1 CdLSGSE12603 88992376 88992617 241 2917
hScc1 G2GSE9613 88992376 88992617 241 2917
p130 QuiescentGSE19898 88992451 88992909 458 3101
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 88948246 88948478 232 0
CTCF CD4SISSRdata 88948246 88948478 232 0
CTCF G2GSE9613 88942323 88943004 681 0
CTCF G2GSE9613 88948285 88948642 357 0
CTCF G2GSE9613 88986654 88987390 736 0
ER E2-MCF7GSE14664 88987278 88987331 53 0
ER E2-MCF7GSE14664 88988669 88988710 41 0
ER Fulvestrant-MCF7GSE14664 88942211 88942245 34 0
Gata2 K562GSE18868 88964579 88965183 604 0
Myc K562GSE19551 88885071 88885483 412 0
Myc K562GSE19551 88915163 88915831 668 0
Nanog hESGSE18292 88927927 88928517 590 0
Oct1 H2O2-HelaGSE14283 88918894 88918929 35 0
Oct1 HelaGSE14283 88876943 88876979 36 0
Oct1 HelaGSE14283 88918894 88918929 35 0
Oct1 HelaGSE14283 88946873 88946926 53 0
PHF8 Hs68minusFBSGSE20725 88873808 88874811 1003 0
PHF8 Hs68plusFBSGSE20725 88873500 88875301 1801 0
STAT1 HeLaGSE12783 88901255 88906923 5668 0
Sox2 hESGSE18292 88928116 88928517 401 0
TAF HelaGSE8489 88891920 88892100 180 0
TFAP2C MCF7GSE21234 88936416 88936853 437 0
hScc1 BcellGSE12603 88938660 88939092 432 0
hScc1 BcellGSE12603 88942183 88942549 366 0
hScc1 BcellGSE12603 88948358 88948677 319 0
hScc1 BcellGSE12603 88968722 88968983 261 0
hScc1 BcellGSE12603 88982588 88982942 354 0
p130 SenescentGSE19898 88896574 88896951 377 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9286 mRNA TORC3 chr15 88874303 88986727 103 EST chr15 88964244 89061375Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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