AutismKB 2.0

Annotation Detail for YTHDC2


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Basic Information Top
Gene Symbol:YTHDC2 ( - )
Gene Full Name: YTH domain containing 2
Band: 5q22.2
Quick LinksEntrez ID:64848; OMIM: NA; Uniprot ID:YTDC2_HUMAN; ENSEMBL ID: ENSG00000047188; HGNC ID: 24721
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
319DEAH box.
1089Phosphoserine.
1263Phosphoserine.
1267Phosphoserine.
1269Phosphoserine.
1273Phosphoserine.
1279Phosphoserine.
1281Phosphoserine.
Location(AA) Modifications Resource
330Phosphoserine.Swiss-Prot 53.0
333PhosphoserinePhospho.ELM 6.0
510PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
100Phosphothreonine(PKC)HMM predict
118Phosphoserine(PKC)HMM predict
251Phosphoserine(CK1)HMM predict
328N-linkedHMM predict
387Phosphoserine(IKK)HMM predict
424Phosphoserine(IKK)HMM predict
437N-linkedHMM predict
438N-linkedHMM predict
443Phosphoserine(CAMK2)HMM predict
443Phosphoserine(PKG)HMM predict
462Phosphoserine(CDK)HMM predict
462Phosphoserine(CDC2)HMM predict
485Phosphothreonine(PKC)HMM predict
485Phosphothreonine(PKA)HMM predict
489Phosphoserine(ATM)HMM predict
493Phosphoserine(IKK)HMM predict
493Phosphoserine(CK1)HMM predict
496Phosphoserine(IKK)HMM predict
501O-linkedHMM predict
504Phosphoserine(IKK)HMM predict
508Phosphoserine(CDC2)HMM predict
510O-linkedHMM predict
518Phosphoserine(PKG)HMM predict
520Phosphoserine(CDC2)HMM predict
520Phosphoserine(CDK)HMM predict
522Phosphoserine(CDC2)HMM predict
522Phosphoserine(CDK)HMM predict
545Phosphoserine(ATM)HMM predict
554Phosphothreonine(CDC2)HMM predict
591Phosphoserine(CAMK2)HMM predict
598Phosphoserine(ATM)HMM predict
619Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022828
  • Location:chr5 112877308-112958877
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 112874559 112874752 193 2653
CTCF CD4SISSRdata 112874559 112874752 193 2653
CTCF G2GSE9613 112874901 112875183 282 2267
Oct1 HelaGSE14283 112860956 112860988 32 16337
hScc1 BcellGSE12603 112874244 112874793 549 2790
hScc1 BcellGSE12603 112876817 112877668 851 66
hScc1 CdLSGSE12603 112874244 112874793 549 2790
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 112970190 112970422 232 11429
CTCF CD4GSE12889 112975559 112976025 466 16915
CTCF CD4SISSRdata 112970190 112970422 232 11429
CTCF CD4SISSRdata 112975559 112976025 466 16915
Nanog hESGSE18292 112975592 112975913 321 16875
Sox2 hESGSE18292 112975681 112976087 406 17007
TFAP2C MCF7GSE21234 112970109 112970432 323 11393
hScc1 BcellGSE12603 112975518 112976048 530 16906
hScc1 CdLSGSE12603 112974947 112976048 1101 16620
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 112876817 112877802 985 0
H3ac HepG2E 112877767 112878379 612 0
Nanog hESGSE18292 112918951 112919226 275 0
Oct1 HelaGSE14283 112909535 112909613 78 0
PHF8 293TGSE20725 112876982 112877909 927 0
PHF8 Hs68minusFBSGSE20725 112876978 112877936 958 0
Rb GrowingGSE19898 112938129 112938337 208 0
TAF HelaGSE8489 112877384 112877695 311 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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