Annotation Detail for PCDH20
Basic Information Top
| Gene Symbol: | PCDH20 ( FLJ22218,PCDH13 ) |
|---|---|
| Gene Full Name: | protocadherin 20 |
| Band: | 13q21.2 |
| Quick Links | Entrez ID:64881; OMIM: NA; Uniprot ID:PCD20_HUMAN; ENSEMBL ID: ENSG00000197991; HGNC ID: 14257 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 108 | N-linked (GlcNAc...) (Potential). | |
| 299 | N-linked (GlcNAc...) (Potential). | |
| 305 | N-linked (GlcNAc...) (Potential). | |
| 653 | N-linked (GlcNAc...) (Potential). | |
| 721 | N-linked (GlcNAc...) (Potential). | |
| 776 | N-linked (GlcNAc...) (Potential). | |
| 817 | N-linked (GlcNAc...) (Potential). | |
| 822 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 108 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 299 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 305 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 653 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 721 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 776 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 817 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 822 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 10 | Phosphoserine | HMM predict |
| 76 | Phosphoserine(IKK) | HMM predict |
| 108 | N-linked | HMM predict |
| 115 | Phosphothreonine(CK2) | HMM predict |
| 138 | O-linked | HMM predict |
| 140 | Phosphoserine(IKK) | HMM predict |
| 142 | O-linked | HMM predict |
| 143 | O-linked | HMM predict |
| 144 | Phosphoserine(ATM) | HMM predict |
| 144 | Phosphoserine(CDC2) | HMM predict |
| 219 | Phosphothreonine(PKC) | HMM predict |
| 299 | N-linked | HMM predict |
| 305 | N-linked | HMM predict |
| 333 | Phosphoserine(ATM) | HMM predict |
| 451 | Phosphoserine(CDK) | HMM predict |
| 451 | Phosphoserine(CDC2) | HMM predict |
| 456 | Phosphotyrosine(Syk) | HMM predict |
| 520 | N-linked | HMM predict |
| 521 | N-linked | HMM predict |
| 524 | N-linked | HMM predict |
| 537 | Phosphoserine(CK1) | HMM predict |
| 581 | Phosphothreonine(PKC) | HMM predict |
| 628 | Phosphotyrosine(INSR) | HMM predict |
| 653 | N-linked | HMM predict |
| 672 | Phosphoserine(PKG) | HMM predict |
| 735 | Phosphoserine(CDC2) | HMM predict |
| 776 | N-linked | HMM predict |
| 802 | Phosphotyrosine(Jak) | HMM predict |
| 802 | Phosphotyrosine(Syk) | HMM predict |
| 817 | N-linked | HMM predict |
| 822 | N-linked | HMM predict |
- RefSeq ID: NM_022843
- Location:chr13 60881821-60887281
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 60901737 | 60901766 | 29 | 14470 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 60877284 | 60877322 | 38 | 4519 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 60885690 | 60885933 | 243 | 0 |
| H3K4me3 | colorectal | cancer | 60886528 | 60887154 | 626 | 0 |
Validated miRNA targets