AutismKB 2.0

Annotation Detail for NT5DC2


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Basic Information Top
Gene Symbol:NT5DC2 ( FLJ12442 )
Gene Full Name: 5'-nucleotidase domain containing 2
Band: 3p21.1
Quick LinksEntrez ID:64943; OMIM: NA; Uniprot ID:NT5D2_HUMAN; ENSEMBL ID: ENSG00000168268; HGNC ID: 25717
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
74Phosphotyrosine(Jak)HMM predict
74SulfotyrosineHMM predict
361Phosphotyrosine(INSR)HMM predict
414Phosphotyrosine(EGFR)HMM predict
454N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022908
  • Location:chr3 52533442-52544109
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 52545605 52545927 322 1657
Fos K562GSE19551 52545218 52546009 791 1504
H3K4me3 colorectalcancer 52546199 52547479 1280 2730
H3ac HepG2E 52545854 52547408 1554 2522
H3ac HepG2E 52547828 52548663 835 4136
PHF8 293TGSE20725 52545313 52546571 1258 1833
PHF8 HeLaGSE20725 52544859 52546564 1705 1602
TAF k562GSE8489 52547828 52548364 536 3987
USF1 HepG2E 52545168 52545403 235 1176
USF1 HepG2E 52545780 52547479 1699 2520
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 52533640 52534306 666 0
CTCF G2GSE9613 52534811 52535675 864 0
CTCF G2GSE9613 52536531 52537106 575 0
CTCF G2GSE9613 52537594 52537778 184 0
CTCF G2GSE9613 52538853 52539198 345 0
CTCF G2GSE9613 52540057 52540360 303 0
CTCF G2GSE9613 52541437 52541947 510 0
CTCF G2GSE9613 52543299 52543562 263 0
ER Fulvestrant-MCF7GSE14664 52542901 52542944 43 0
Oct1 HelaGSE14283 52542902 52542939 37 0
Oct1 HelaGSE14283 52543860 52543918 58 0
RNAII Tamoxifen-MCF7GSE14664 52543864 52543899 35 0
TFAP2C MCF7GSE21234 52543869 52544257 388 0
hScc1 BcellGSE12603 52533781 52534951 1170 0
hScc1 BcellGSE12603 52535231 52535441 210 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
18157 mRNA STAB1 chr3 52504395 52533549 107 mRNA FLJ12442 chr3 52533442 52544110Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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