AutismKB 2.0

Annotation Detail for SKI


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Basic Information Top
Gene Symbol:SKI ( SKV )
Gene Full Name: v-ski sarcoma viral oncogene homolog (avian)
Band: 1p36.33-p36.32
Quick LinksEntrez ID:6497; OMIM: 164780; Uniprot ID:SKI_HUMAN; ENSEMBL ID: ENSG00000157933; HGNC ID: 10896
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
432Phosphoserine.
480Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
30Phosphoserine(CK1)HMM predict
47Phosphotyrosine(Syk)HMM predict
47Phosphotyrosine(Jak)HMM predict
98Phosphothreonine(PKC)HMM predict
237Phosphotyrosine(Abl)HMM predict
239Phosphoserine(CDC2)HMM predict
239Phosphoserine(ATM)HMM predict
239PhosphoserineHMM predict
239Phosphoserine(CDK)HMM predict
269N-linkedHMM predict
340O-linkedHMM predict
341Phosphoserine(ATM)HMM predict
341O-linkedHMM predict
343PhosphoserineHMM predict
343Phosphoserine(IKK)HMM predict
343Phosphoserine(ATM)HMM predict
383Phosphoserine(IKK)HMM predict
432O-linkedHMM predict
458Phosphothreonine(PKA)HMM predict
458Phosphothreonine(PKC)HMM predict
480Phosphoserine(CK2)HMM predict
498Phosphoserine(IKK)HMM predict
498Phosphoserine(CK1)HMM predict
501Phosphoserine(CDC2)HMM predict
503O-linkedHMM predict
503Phosphoserine(IKK)HMM predict
505Phosphothreonine(PKC)HMM predict
715ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003036
  • Location:chr1 2149993-2229315
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 2133948 2134255 307 15892
CTCF CD4SISSRdata 2133948 2134255 307 15892
CTCF G2GSE9613 2134471 2134791 320 15363
CTCF G2GSE9613 2135833 2136276 443 13939
CTCF G2GSE9613 2136723 2138144 1421 12560
CTCF G2GSE9613 2145993 2146238 245 3878
CTCF G2GSE9613 2147703 2149172 1469 1556
NFkBII GM10847GSE19485 2148400 2149863 1463 862
NFkBII GM15510GSE19485 2148728 2149828 1100 716
PHF8 Hs68plusFBSGSE20725 2148100 2149133 1033 1377
Pol2 GM12878GSE19551 2149092 2149547 455 674
hScc1 BcellGSE12603 2134436 2134791 355 15380
hScc1 BcellGSE12603 2135637 2137375 1738 13488
hScc1 BcellGSE12603 2145506 2146167 661 4157
hScc1 BcellGSE12603 2148124 2149172 1048 1346
p130 QuiescentGSE19898 2135166 2136014 848 14404
p130 SenescentGSE19898 2133551 2134793 1242 15822
p130 SenescentGSE19898 2135165 2135957 792 14433
p130 shRbQuiescentGSE19898 2133569 2136049 2480 15185
p130 shRbSenescentGSE19898 2133456 2134877 1421 15827
p130 shRbSenescentGSE19898 2134982 2136206 1224 14400
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 2231688 2232029 341 2543
CTCF G2GSE9613 2233393 2233980 587 4371
CTCF G2GSE9613 2234430 2235046 616 5423
CTCF G2GSE9613 2235298 2235967 669 6317
KLF4 hESGSE17917 2231077 2231268 191 1857
TFAP2C MCF7GSE21234 2232734 2233409 675 3756
hScc1 BcellGSE12603 2233329 2234048 719 4373
p130 SenescentGSE19898 2232439 2232723 284 3266
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 2176135 2178257 2122 0
CBP JurkatGSE17954 2196785 2198390 1605 0
CBP T30-glioblastomaGSE21026 2211854 2212764 910 0
CTCF G2GSE9613 2150078 2150526 448 0
CTCF G2GSE9613 2151385 2151770 385 0
CTCF G2GSE9613 2152231 2152936 705 0
CTCF G2GSE9613 2158298 2158726 428 0
CTCF G2GSE9613 2168021 2168200 179 0
CTCF G2GSE9613 2175188 2175442 254 0
CTCF G2GSE9613 2190976 2192175 1199 0
CTCF G2GSE9613 2195022 2195869 847 0
CTCF G2GSE9613 2201972 2203788 1816 0
CTCF G2GSE9613 2215706 2216055 349 0
CTCF G2GSE9613 2218705 2218935 230 0
CTCF G2GSE9613 2219735 2220126 391 0
CTCF G2GSE9613 2225169 2225999 830 0
CTCF G2GSE9613 2227163 2228151 988 0
CTCF G2GSE9613 2228433 2228719 286 0
ETS1 JurkatGSE17954 2176546 2177782 1236 0
ETS1 JurkatGSE17954 2221714 2222928 1214 0
GABP GMOGSE8489 2175102 2177972 2870 0
GABP HelaGSE8489 2175888 2177972 2084 0
GABP k562GSE8489 2178616 2178983 367 0
GABP k562GSE8489 2179353 2179813 460 0
GABP k562GSE8489 2180635 2180812 177 0
H3ac HepG2E 2151043 2153887 2844 0
H3ac HepG2E 2154509 2155752 1243 0
H3ac HepG2E 2169803 2171179 1376 0
H3ac HepG2E 2172795 2173683 888 0
H3ac HepG2E 2183133 2183829 696 0
LIN9 G0GSE7516 2150078 2150270 192 0
P300 T0-glioblastomaGSE21026 2211604 2212723 1119 0
P300 T30-glioblastomaGSE21026 2211467 2212909 1442 0
RARA MCF7GSE15244 2191568 2191935 367 0
Rb QuiescentGSE19898 2200416 2200955 539 0
Rb SenescentGSE19898 2167751 2167916 165 0
Rb shRbSenescenceGSE19898 2199017 2199213 196 0
TFAP2C MCF7GSE21234 2155429 2156071 642 0
TFAP2C MCF7GSE21234 2161305 2161925 620 0
TFAP2C MCF7GSE21234 2171876 2172338 462 0
TFAP2C MCF7GSE21234 2173029 2173423 394 0
TFAP2C MCF7GSE21234 2180033 2180523 490 0
TFAP2C MCF7GSE21234 2199291 2199873 582 0
TFAP2C MCF7GSE21234 2211148 2211830 682 0
hScc1 BcellGSE12603 2150078 2150906 828 0
hScc1 BcellGSE12603 2151282 2151687 405 0
hScc1 BcellGSE12603 2169133 2169392 259 0
hScc1 BcellGSE12603 2170308 2170650 342 0
hScc1 BcellGSE12603 2191051 2191863 812 0
hScc1 BcellGSE12603 2194295 2194873 578 0
hScc1 BcellGSE12603 2195571 2195940 369 0
hScc1 BcellGSE12603 2197596 2197825 229 0
hScc1 BcellGSE12603 2202015 2203872 1857 0
hScc1 BcellGSE12603 2221294 2221620 326 0
hScc1 BcellGSE12603 2225244 2225901 657 0
hScc1 BcellGSE12603 2228498 2228849 351 0
hScc1 CdLSGSE12603 2150078 2150870 792 0
p130 QuiescentGSE19898 2200563 2201023 460 0
p130 QuiescentGSE19898 2211998 2212391 393 0
p130 SenescentGSE19898 2163092 2163305 213 0
p130 SenescentGSE19898 2167716 2168089 373 0
p130 SenescentGSE19898 2211897 2212816 919 0
p130 SenescentGSE19898 2215660 2216014 354 0
p130 shRbQuiescentGSE19898 2167694 2168024 330 0
p130 shRbQuiescentGSE19898 2211506 2212435 929 0
p130 shRbQuiescentGSE19898 2212512 2213011 499 0
p130 shRbSenescentGSE19898 2167678 2168032 354 0
p130 shRbSenescentGSE19898 2194826 2195076 250 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
78 mRNA SKI chr1 2192295 2271618 562 EST chr1 2270692 2300444Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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