AutismKB 2.0

Annotation Detail for SKIV2L


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Basic Information Top
Gene Symbol:SKIV2L ( 170A,DDX13,HLP,SKI2,SKI2W,SKIV2 )
Gene Full Name: superkiller viralicidic activity 2-like (S. cerevisiae)
Band: 6p21.33
Quick LinksEntrez ID:6499; OMIM: 600478; Uniprot ID:SKIV2_HUMAN; ENSEMBL ID: ENSG00000204351; HGNC ID: 10898
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
245Phosphoserine.
256Phosphoserine.
366Phosphoserine.
426DEVH box.
Location(AA) Modifications Resource
245Phosphoserine.Swiss-Prot 53.0
245PhosphoserinePhospho.ELM 6.0
256Phosphoserine.Swiss-Prot 53.0
256PhosphoserinePhospho.ELM 6.0
366Phosphoserine.Swiss-Prot 53.0
366PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
42O-linkedHMM predict
42Phosphoserine(CK1)HMM predict
125N-linkedHMM predict
148N-linkedHMM predict
165O-linkedHMM predict
203O-linkedHMM predict
245Phosphoserine(IKK)HMM predict
248O-linkedHMM predict
255Phosphoserine(CK2)HMM predict
255Phosphoserine(PKG)HMM predict
256Phosphoserine(CK1)HMM predict
271O-linkedHMM predict
271Phosphothreonine(CDK)HMM predict
291Phosphoserine(MAPK)HMM predict
358Phosphotyrosine(INSR)HMM predict
360Phosphoserine(CDC2)HMM predict
495N-linkedHMM predict
530Phosphoserine(CK1)HMM predict
594Phosphoserine(CDC2)HMM predict
598Phosphoserine(CK1)HMM predict
607S-palmitoylHMM predict
697Phosphotyrosine(INSR)HMM predict
738Phosphoserine(ATM)HMM predict
769Phosphoserine(PKG)HMM predict
779Phosphoserine(PKG)HMM predict
811SulfotyrosineHMM predict
865N-linkedHMM predict
866Phosphoserine(CK1)HMM predict
868O-linkedHMM predict
882Phosphoserine(ATM)HMM predict
945Phosphoserine(CK1)HMM predict
1017Phosphoserine(CDC2)HMM predict
1102Phosphothreonine(PKC)HMM predict
1155N-linkedHMM predict
1174Phosphotyrosine(SRC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006929
  • Location:chr6 32034559-32045510
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32034781 32034921 140 0
CTCF CD4SISSRdata 32034781 32034921 140 0
CTCF G2GSE9613 32037335 32037598 263 0
CTCF G2GSE9613 32039595 32039902 307 0
CTCF G2GSE9613 32041589 32041807 218 0
CTCF G2GSE9613 32042213 32042743 530 0
CTCF G2GSE9613 32044229 32044409 180 0
CTCF G2GSE9613 32045027 32045406 379 0
H3ac HepG2E 32034785 32035411 626 0
NFkBII GM15510GSE19485 32034381 32035675 1294 0
P300 T0-glioblastomaGSE21026 32034427 32035336 909 0
PHF8 293TGSE20725 32034381 32035436 1055 0
hScc1 BcellGSE12603 32034595 32035295 700 0
hScc1 BcellGSE12603 32039595 32039978 383 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018