AutismKB 2.0

Annotation Detail for NDRG4


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Basic Information Top
Gene Symbol:NDRG4 ( DKFZp686I1615,FLJ30586,FLJ42011,KIAA1180,MGC19632,SMAP-8 )
Gene Full Name: NDRG family member 4
Band: 16q21
Quick LinksEntrez ID:65009; OMIM: NA; Uniprot ID:NDRG4_HUMAN; ENSEMBL ID: ENSG00000103034; HGNC ID: 14466
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
298Phosphoserine (By similarity).
Location(AA) Modifications Resource
298Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
25Phosphoserine(CDC2)HMM predict
78Phosphoserine(ATM)HMM predict
171Phosphoserine(CK1)HMM predict
177N-linkedHMM predict
178N-linkedHMM predict
224Phosphothreonine(PKC)HMM predict
298Phosphoserine(PKG)HMM predict
317Phosphoserine(PKB)HMM predict
317Phosphoserine(IKK)HMM predict
317Phosphoserine(CAMK2)HMM predict
317Phosphoserine(PKA)HMM predict
317O-linkedHMM predict
319O-linkedHMM predict
320O-linkedHMM predict
323Phosphoserine(CAMK2)HMM predict
335SerineHMM predict
338Phosphoserine(CK1)HMM predict
345N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020465
  • Location:chr16 57055117-57105022
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 57054461 57055432 971 171
Fos K562GSE19551 57050617 57051312 695 4153
Oct1 H2O2-HelaGSE14283 57047831 57047858 27 7273
Oct1 H2O2-HelaGSE14283 57048514 57048540 26 6591
Oct1 HelaGSE14283 57038513 57038540 27 16591
Rb GrowingGSE19898 57042717 57042845 128 12337
hScc1 BcellGSE12603 57053434 57055525 2091 638
p130 SenescentGSE19898 57052608 57052887 279 2370
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 57062417 57063091 674 0
H3K27me3 colorectalcancer 57056374 57057387 1013 0
hScc1 BcellGSE12603 57065126 57065389 263 0
hScc1 CdLSGSE12603 57054754 57055567 813 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10068 mRNA NDRG4 chr16 57055117 57105023 338 EST chr16 57103967 57104305Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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