Annotation Detail for UPF3B
Basic Information Top
| Gene Symbol: | UPF3B ( HUPF3B,MRXS14,RENT3B,UPF3X ) |
|---|---|
| Gene Full Name: | UPF3 regulator of nonsense transcripts homolog B (yeast) |
| Band: | Xq24 |
| Quick Links | Entrez ID:65109; OMIM: 300298; Uniprot ID:REN3B_HUMAN; ENSEMBL ID: ENSG00000125351; HGNC ID: 20439 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 169 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 15 | Phosphothreonine(PKA) | HMM predict |
| 25 | O-linked | HMM predict |
| 34 | Phosphoserine(CK2) | HMM predict |
| 79 | Phosphotyrosine(Syk) | HMM predict |
| 85 | N-linked | HMM predict |
| 127 | Phosphotyrosine(EGFR) | HMM predict |
| 144 | Phosphothreonine(PKC) | HMM predict |
| 149 | Phosphothreonine(PKA) | HMM predict |
| 160 | Phosphotyrosine(EGFR) | HMM predict |
| 310 | Phosphoserine(CK1) | HMM predict |
| 315 | Phosphoserine(CK2) | HMM predict |
| 318 | Phosphoserine(IKK) | HMM predict |
| 352 | Sulfotyrosine | HMM predict |
| 399 | Phosphothreonine(PKC) | HMM predict |
| 409 | Phosphoserine(CK2) | HMM predict |
| 412 | Phosphoserine(CK1) | HMM predict |
| 412 | Phosphoserine(IKK) | HMM predict |
| 419 | Phosphothreonine | HMM predict |
- RefSeq ID: NM_023010
- Location:chrX 118852016-118870995
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| P300 | T0-glioblastoma | GSE21026 | 118870863 | 118871484 | 621 | 178 |
| P300 | T30-glioblastoma | GSE21026 | 118870637 | 118871726 | 1089 | 186 |
| Rb | Senescent | GSE19898 | 118870822 | 118871308 | 486 | 70 |
| Rb | shRbSenescence | GSE19898 | 118870976 | 118871204 | 228 | 95 |
| p130 | Quiescent | GSE19898 | 118871029 | 118871243 | 214 | 141 |
| p130 | shRbQuiescent | GSE19898 | 118870820 | 118871210 | 390 | 20 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 118832774 | 118832808 | 34 | 19226 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 118870788 | 118871118 | 330 | 0 |
| ETS1 | Jurkat | GSE17954 | 118870521 | 118871468 | 947 | 0 |
| H3K4me3 | colorectal | cancer | 118870022 | 118870503 | 481 | 0 |
| H3ac | HepG2 | E | 118869826 | 118870930 | 1104 | 0 |
| PHF8 | HeLa | GSE20725 | 118870373 | 118871353 | 980 | 0 |
| PolII | HeLa | GSE12783 | 118869962 | 118871573 | 1611 | 0 |
| hScc1 | Bcell | GSE12603 | 118870710 | 118871259 | 549 | 0 |
| hScc1 | G2 | GSE9613 | 118870710 | 118871073 | 363 | 0 |
| p130 | Senescent | GSE19898 | 118870440 | 118871295 | 855 | 0 |
| p130 | shRbSenescent | GSE19898 | 118870666 | 118871297 | 631 | 0 |
Validated miRNA targets