AutismKB 2.0

Annotation Detail for ZSWIM4


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Basic Information Top
Gene Symbol:ZSWIM4 ( - )
Gene Full Name: zinc finger, SWIM-type containing 4
Band: 19p13.13
Quick LinksEntrez ID:65249; OMIM: NA; Uniprot ID:ZSWM4_HUMAN; ENSEMBL ID: ENSG00000132003; HGNC ID: 25704
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
640Phosphoserine (By similarity).
Location(AA) Modifications Resource
Location(AA) Modification Resource
10MethylarginineHMM predict
27MethylarginineHMM predict
29MethylarginineHMM predict
87Phosphotyrosine(Jak)HMM predict
87Phosphotyrosine(INSR)HMM predict
131Phosphoserine(ATM)HMM predict
131Phosphoserine(IKK)HMM predict
131Phosphoserine(CDC2)HMM predict
274Phosphotyrosine(INSR)HMM predict
377N-linkedHMM predict
388O-linkedHMM predict
388O-linkedHMM predict
441Phosphoserine(ATM)HMM predict
458Phosphoserine(IKK)HMM predict
458Phosphoserine(CDC2)HMM predict
486Phosphotyrosine(Abl)HMM predict
586Phosphoserine(ATM)HMM predict
640Phosphoserine(MAPK)HMM predict
659O-linkedHMM predict
733O-linkedHMM predict
781N-linkedHMM predict
856Phosphoserine(CK1)HMM predict
887Phosphothreonine(PKA)HMM predict
927O-linkedHMM predict
988PhenylalanineHMM predict
989PhenylalanineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_023072
  • Location:chr19 13767273-13804043
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 13766386 13767782 1396 190
Myc hESGSE17917 13759737 13760000 263 7405
P300 T30-glioblastomaGSE21026 13759294 13760353 1059 7450
Rb GrowingGSE19898 13766734 13767023 289 395
Rb QuiescentGSE19898 13766745 13766997 252 403
Rb SenescentGSE19898 13766693 13767093 400 381
Rb SenescentGSE19898 13767115 13767275 160 79
p130 QuiescentGSE19898 13766648 13766952 304 474
p130 QuiescentGSE19898 13767103 13767291 188 77
p130 SenescentGSE19898 13759691 13759970 279 7443
p130 SenescentGSE19898 13766672 13767311 639 282
p130 shRbQuiescentGSE19898 13766471 13767358 887 359
p130 shRbSenescentGSE19898 13766878 13767209 331 230
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13805512 13805795 283 1610
CTCF CD4SISSRdata 13805512 13805795 283 1610
CTCF G2GSE9613 13805516 13806259 743 1844
CTCF G2GSE9613 13808026 13808374 348 4157
CTCF G2GSE9613 13810715 13811074 359 6851
CTCF G2GSE9613 13811401 13811768 367 7541
ER MCF7GSE19013 13807303 13808022 719 3619
ER MCF7GSE19013 13818564 13819231 667 14854
ER MCF7GSE19013 13822733 13823257 524 18952
Fos K562GSE19551 13805195 13805958 763 1533
Fos K562GSE19551 13822032 13823643 1611 18794
NFkBII GM12878GSE19485 13810185 13811965 1780 7032
NFkBII GM12892GSE19485 13810248 13813686 3438 7924
Rb QuiescentGSE19898 13810775 13811020 245 6854
Rb QuiescentGSE19898 13811881 13811999 118 7897
TAF k562GSE8489 13812525 13812945 420 8692
TFAP2C MCF7GSE21234 13807390 13807976 586 3640
TFAP2C MCF7GSE21234 13811967 13812687 720 8284
TFAP2C MCF7GSE21234 13813010 13813694 684 9309
TFAP2C MCF7GSE21234 13815244 13816572 1328 11865
TFAP2C MCF7GSE21234 13818572 13819919 1347 15202
hScc1 BcellGSE12603 13810715 13811768 1053 7198
hScc1 BcellGSE12603 13814041 13814563 522 10259
hScc1 BcellGSE12603 13821190 13821377 187 17240
p130 QuiescentGSE19898 13811161 13811552 391 7313
p130 QuiescentGSE19898 13818379 13819231 852 14762
p130 QuiescentGSE19898 13819279 13820013 734 15603
p130 SenescentGSE19898 13810686 13811005 319 6802
p130 SenescentGSE19898 13818143 13819590 1447 14823
p130 SenescentGSE19898 13822431 13823753 1322 19049
p130 shRbQuiescentGSE19898 13814910 13815602 692 11213
p130 shRbQuiescentGSE19898 13818161 13820278 2117 15176
p130 shRbQuiescentGSE19898 13822665 13823748 1083 19163
p130 shRbSenescentGSE19898 13811227 13811449 222 7295
p130 shRbSenescentGSE19898 13818207 13820060 1853 15090
p130 shRbSenescentGSE19898 13822500 13823737 1237 19075
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13776665 13776848 183 0
CTCF CD4SISSRdata 13776665 13776848 183 0
CTCF G2GSE9613 13776490 13776849 359 0
CTCF G2GSE9613 13786439 13786663 224 0
Fos K562GSE19551 13789065 13789516 451 0
KLF4 hESGSE17917 13789297 13789580 283 0
Myc K562GSE19551 13776595 13776883 288 0
Rb GrowingGSE19898 13767620 13767902 282 0
hScc1 BcellGSE12603 13776490 13776884 394 0
hScc1 BcellGSE12603 13789802 13790341 539 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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