AutismKB 2.0

Annotation Detail for LGALS9C


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Basic Information Top
Gene Symbol:LGALS9C ( MGC125972 )
Gene Full Name: lectin, galactoside-binding, soluble, 9C
Band: 17p11.2
Quick LinksEntrez ID:654346; OMIM: NA; Uniprot ID:LEG9C_HUMAN; ENSEMBL ID: ENSG00000171916; HGNC ID: 33874
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001040078
  • Location:chr17 18320823-18338982
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 18302783 18303816 1033 17524
GABP HelaGSE8489 18302975 18304274 1299 17199
P300 T30-glioblastomaGSE21026 18302750 18303902 1152 17498
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 18339811 18340191 380 1019
CTCF G2GSE9613 18340793 18341954 1161 2391
CTCF G2GSE9613 18344132 18344892 760 5530
NRSF mAbJurkat 18344821 18346771 1950 6814
hScc1 BcellGSE12603 18340012 18340657 645 1352
hScc1 BcellGSE12603 18341107 18341954 847 2548
hScc1 BcellGSE12603 18344132 18345468 1336 5818
hScc1 CdLSGSE12603 18340958 18341534 576 2264
hScc1 CdLSGSE12603 18344406 18345002 596 5722
hScc1 G2GSE9613 18340793 18342799 2006 2814
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 18334417 18335009 592 0
Oct1 H2O2-HelaGSE14283 18329802 18329834 32 0
TFAP2C MCF7GSE21234 18325464 18326095 631 0
hScc1 BcellGSE12603 18321987 18322278 291 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018