Annotation Detail for SLC18A1
Basic Information Top
| Gene Symbol: | SLC18A1 ( CGAT,VAT1,VMAT1 ) |
|---|---|
| Gene Full Name: | solute carrier family 18 (vesicular monoamine), member 1 |
| Band: | 8p21.3 |
| Quick Links | Entrez ID:6570; OMIM: 193002; Uniprot ID:VMAT1_HUMAN; ENSEMBL ID: ENSG00000036565; HGNC ID: 10934 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 58 | N-linked (GlcNAc...) (Potential). | |
| 87 | N-linked (GlcNAc...) (Potential). | |
| 104 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 58 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 87 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 104 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 58 | N-linked | HMM predict |
| 75 | O-linked | HMM predict |
| 87 | N-linked | HMM predict |
| 88 | N-linked | HMM predict |
| 104 | N-linked | HMM predict |
| 115 | O-linked | HMM predict |
| 284 | Phosphoserine(CDC2) | HMM predict |
| 426 | Phosphotyrosine(SRC) | HMM predict |
| 512 | Proline | HMM predict |
| 517 | Phosphoserine(CK2) | HMM predict |
- RefSeq ID: NM_003053
- Location:chr8 20046651-20084996
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 20086738 | 20086872 | 134 | 1809 |
| CTCF | CD4 | SISSRdata | 20086738 | 20086872 | 134 | 1809 |
| CTCF | Jurkat | GSE12889 | 20086717 | 20086903 | 186 | 1814 |
| CTCF | G2 | GSE9613 | 20086551 | 20087042 | 491 | 1800 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 20035493 | 20035896 | 403 | 10957 |
| CTCF | CD4 | SISSRdata | 20035493 | 20035896 | 403 | 10957 |
| CTCF | G2 | GSE9613 | 20028651 | 20029009 | 358 | 17822 |
| CTCF | G2 | GSE9613 | 20031274 | 20031422 | 148 | 15304 |
| CTCF | G2 | GSE9613 | 20035509 | 20035865 | 356 | 10965 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 20028794 | 20028889 | 95 | 17810 |
| TFAP2C | MCF7 | GSE21234 | 20030620 | 20031181 | 561 | 15751 |
| hScc1 | Bcell | GSE12603 | 20035509 | 20035865 | 356 | 10965 |
| hScc1 | CdLS | GSE12603 | 20035509 | 20035865 | 356 | 10965 |
| hScc1 | G2 | GSE9613 | 20035509 | 20035865 | 356 | 10965 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 20047298 | 20047686 | 388 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 20046979 | 20047433 | 454 | 0 |
| p63 | keratinocytes | GSE17611 | 20061186 | 20062106 | 920 | 0 |
Validated miRNA targets