AutismKB 2.0

Annotation Detail for SLC20A2


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Basic Information Top
Gene Symbol:SLC20A2 ( GLVR2,Glvr-2,MLVAR,PIT-2 )
Gene Full Name: solute carrier family 20 (phosphate transporter), member 2
Band: 8p11.21
Quick LinksEntrez ID:6575; OMIM: 158378; Uniprot ID:S20A2_HUMAN; ENSEMBL ID: ENSG00000168575; HGNC ID: 10947
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
81N-linked (GlcNAc...).
268Phosphoserine.
377Phosphotyrosine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006749
  • Location:chr8 42393151-42516224
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 42389054 42389380 326 3935
CTCF CD4SISSRdata 42389054 42389380 326 3935
CTCF G2GSE9613 42388586 42389341 755 4188
CTCF G2GSE9613 42391517 42391785 268 1501
CTCF G2GSE9613 42392034 42392365 331 952
USF1 HepG2E 42389641 42389851 210 3406
hScc1 BcellGSE12603 42388549 42389851 1302 3952
hScc1 CdLSGSE12603 42388880 42389341 461 4041
hScc1 G2GSE9613 42388586 42389641 1055 4038
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 42434753 42434976 223 0
CTCF CD4SISSRdata 42434753 42434976 223 0
CTCF G2GSE9613 42405170 42405574 404 0
CTCF G2GSE9613 42406368 42406632 264 0
CTCF G2GSE9613 42413179 42413458 279 0
CTCF G2GSE9613 42444200 42444525 325 0
CTCF G2GSE9613 42461448 42461789 341 0
CTCF G2GSE9613 42515204 42516389 1185 0
ER E2-MCF7GSE14664 42401940 42401972 32 0
ER E2-MCF7GSE14664 42432353 42432391 38 0
ER E2-MCF7GSE14664 42497482 42497577 95 0
ER E2-MCF7GSE14664 42508038 42508073 35 0
ER Fulvestrant-MCF7GSE14664 42432352 42432388 36 0
FOXA1 DLD1GSE12801 42436066 42436653 587 0
FOXA1 DLD1GSE12801 42479296 42480110 814 0
FOXA1 MCF7GSE15244 42437537 42438073 536 0
FOXA1 MCF7GSE15244 42447677 42448151 474 0
FOXA1 MCF7GSE15244 42448733 42449268 535 0
FOXA1 MCF7GSE15244 42477915 42478240 325 0
Fos K562GSE19551 42500144 42500720 576 0
FoxA1 MCF7MACSdata 42437600 42437724 124 0
FoxA1 MCF7MACSdata 42479084 42479423 339 0
FoxA1 MCF7MACSdata 42500318 42500589 271 0
H3K4me3 colorectalcancer 42514849 42515410 561 0
H3ac HepG2E 42474399 42474630 231 0
H3ac HepG2E 42474971 42475414 443 0
H3ac HepG2E 42475804 42476630 826 0
H3ac HepG2E 42512892 42514118 1226 0
H3ac HepG2E 42514849 42515481 632 0
NRSF pAbJurkat 42406297 42406666 369 0
Nanog hESGSE18292 42476354 42476853 499 0
Oct1 H2O2-HelaGSE14283 42416652 42416690 38 0
Oct1 HelaGSE14283 42394235 42394266 31 0
Oct1 HelaGSE14283 42416650 42416696 46 0
Oct1 HelaGSE14283 42431768 42431797 29 0
Oct1 HelaGSE14283 42432355 42432399 44 0
Oct1 HelaGSE14283 42432508 42432535 27 0
Oct1 HelaGSE14283 42487183 42487219 36 0
Oct1 HelaGSE14283 42496098 42496128 30 0
P300 T30-glioblastomaGSE21026 42483917 42484877 960 0
RARG MCF7GSE15244 42447677 42448110 433 0
TAF k562GSE8489 42514849 42515520 671 0
TFAP2C MCF7GSE21234 42461233 42461784 551 0
TFAP2C MCF7GSE21234 42479051 42479463 412 0
hScc1 BcellGSE12603 42413128 42413718 590 0
hScc1 CdLSGSE12603 42434692 42434980 288 0
hScc1 CdLSGSE12603 42515204 42516311 1107 0
p130 shRbQuiescentGSE19898 42449779 42450381 602 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25362 HTC chr8 42515907 42527024 105 mRNA SLC20A2 chr8 42393149 42516225Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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