Annotation Detail for SLIT3
Basic Information Top
Gene Symbol: | SLIT3 ( FLJ10764,MEGF5,SLIL2,SLIT1,Slit-3,slit2 ) |
---|---|
Gene Full Name: | slit homolog 3 (Drosophila) |
Band: | 5q34-q35.1 |
Quick Links | Entrez ID:6586; OMIM: 603745; Uniprot ID:SLIT3_HUMAN; ENSEMBL ID: ENSG00000184347; HGNC ID: 11087 |
Relate to Another Database: | SFARIGene; denovo-db |
Location(AA) | Modification | |
---|---|---|
72 | N-linked (GlcNAc...) (Potential). | |
192 | N-linked (GlcNAc...) (Potential). | |
563 | N-linked (GlcNAc...) (Potential). | |
622 | N-linked (GlcNAc...) (Potential). | |
784 | N-linked (GlcNAc...) (Potential). | |
792 | N-linked (GlcNAc...) (Potential). | |
797 | N-linked (GlcNAc...) (Potential). | |
928 | N-linked (GlcNAc...) (Potential). | |
1008 | N-linked (GlcNAc...) (Potential). | |
1025 | N-linked (GlcNAc...) (Potential). | |
1181 | N-linked (GlcNAc...) (Potential). | |
1247 | N-linked (GlcNAc...) (Potential). | |
1406 | N-linked (GlcNAc...) (Potential). |
Location(AA) | Modifications | Resource |
---|---|---|
72 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
192 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
563 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
622 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
784 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
792 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
797 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
928 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
1008 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
1025 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
1181 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
1247 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
1406 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
Location(AA) | Modification | Resource |
---|---|---|
39 | O-linked | HMM predict |
72 | N-linked | HMM predict |
98 | Phosphoserine(CK2) | HMM predict |
261 | Phosphotyrosine(Jak) | HMM predict |
261 | Phosphotyrosine(INSR) | HMM predict |
268 | Phosphoserine(IKK) | HMM predict |
272 | Phosphoserine(IKK) | HMM predict |
282 | Phosphoserine(IKK) | HMM predict |
417 | Phosphothreonine(PKC) | HMM predict |
466 | Phosphoserine(CDC2) | HMM predict |
491 | Phosphotyrosine(Syk) | HMM predict |
497 | Phosphoserine(PKB) | HMM predict |
622 | N-linked | HMM predict |
792 | N-linked | HMM predict |
797 | N-linked | HMM predict |
837 | Phosphoserine(CK1) | HMM predict |
848 | Phosphoserine(CK1) | HMM predict |
886 | Phosphoserine(IKK) | HMM predict |
886 | Phosphoserine(CDC2) | HMM predict |
923 | Phosphoserine(CDC2) | HMM predict |
928 | N-linked | HMM predict |
1008 | N-linked | HMM predict |
1025 | N-linked | HMM predict |
1097 | O-linked | HMM predict |
1121 | Phosphoserine(IKK) | HMM predict |
1168 | Phosphotyrosine(EGFR) | HMM predict |
1221 | O-linked | HMM predict |
1222 | Phosphoserine(CDC2) | HMM predict |
1222 | O-linked | HMM predict |
1225 | O-linked | HMM predict |
1228 | Phosphotyrosine(SRC) | HMM predict |
1247 | N-linked | HMM predict |
1251 | N-linked | HMM predict |
1275 | Phosphoserine(MAPK) | HMM predict |
1338 | S-palmitoyl | HMM predict |
1377 | S-palmitoyl | HMM predict |
1406 | N-linked | HMM predict |
1410 | N-linked | HMM predict |
1482 | S-palmitoyl | HMM predict |
1492 | Phosphoserine(CDK) | HMM predict |
1492 | Phosphoserine(PKC) | HMM predict |
1506 | Phosphoserine(CK2) | HMM predict |
1523 | Serine | HMM predict |
- RefSeq ID: NM_003062
- Location:chr5 168025859-168660553
- strand:-
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CTCF | CD4 | GSE12889 | 168662173 | 168662386 | 213 | 1726 |
CTCF | CD4 | SISSRdata | 168662173 | 168662386 | 213 | 1726 |
CTCF | Jurkat | GSE12889 | 168662192 | 168662390 | 198 | 1738 |
CTCF | G2 | GSE9613 | 168659946 | 168661380 | 1434 | 110 |
CTCF | G2 | GSE9613 | 168662022 | 168662568 | 546 | 1742 |
H3K27me3 | colorectal | cancer | 168660808 | 168662393 | 1585 | 1047 |
hScc1 | Bcell | GSE12603 | 168661983 | 168662393 | 410 | 1635 |
hScc1 | CdLS | GSE12603 | 168661983 | 168662430 | 447 | 1653 |
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
FoxA1 | MCF7 | MACSdata | 168006834 | 168006999 | 165 | 18943 |
Rb | Growing | GSE19898 | 168011457 | 168011667 | 210 | 14298 |
p63 | keratinocytes | GSE17611 | 168005655 | 168007201 | 1546 | 19432 |
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CBP | T0-glioblastoma | GSE21026 | 168353861 | 168354471 | 610 | 0 |
CBP | T30-glioblastoma | GSE21026 | 168071706 | 168072802 | 1096 | 0 |
CTCF | CD4 | GSE12889 | 168039124 | 168039334 | 210 | 0 |
CTCF | CD4 | GSE12889 | 168306898 | 168307087 | 189 | 0 |
CTCF | CD4 | GSE12889 | 168347250 | 168347424 | 174 | 0 |
CTCF | CD4 | SISSRdata | 168039124 | 168039334 | 210 | 0 |
CTCF | CD4 | SISSRdata | 168306898 | 168307087 | 189 | 0 |
CTCF | CD4 | SISSRdata | 168347250 | 168347424 | 174 | 0 |
CTCF | Hela | GSE12889 | 168038996 | 168039368 | 372 | 0 |
CTCF | Hela | GSE12889 | 168107948 | 168108162 | 214 | 0 |
CTCF | Jurkat | GSE12889 | 168107969 | 168108141 | 172 | 0 |
CTCF | G2 | GSE9613 | 168029347 | 168030068 | 721 | 0 |
CTCF | G2 | GSE9613 | 168030686 | 168031242 | 556 | 0 |
CTCF | G2 | GSE9613 | 168039172 | 168039540 | 368 | 0 |
CTCF | G2 | GSE9613 | 168040118 | 168040416 | 298 | 0 |
CTCF | G2 | GSE9613 | 168041291 | 168041635 | 344 | 0 |
CTCF | G2 | GSE9613 | 168043326 | 168043647 | 321 | 0 |
CTCF | G2 | GSE9613 | 168046519 | 168046694 | 175 | 0 |
CTCF | G2 | GSE9613 | 168058659 | 168058979 | 320 | 0 |
CTCF | G2 | GSE9613 | 168061028 | 168061749 | 721 | 0 |
CTCF | G2 | GSE9613 | 168062312 | 168062445 | 133 | 0 |
CTCF | G2 | GSE9613 | 168071958 | 168072111 | 153 | 0 |
CTCF | G2 | GSE9613 | 168095872 | 168096388 | 516 | 0 |
CTCF | G2 | GSE9613 | 168107824 | 168108318 | 494 | 0 |
CTCF | G2 | GSE9613 | 168110654 | 168110943 | 289 | 0 |
CTCF | G2 | GSE9613 | 168112463 | 168112671 | 208 | 0 |
CTCF | G2 | GSE9613 | 168120219 | 168120547 | 328 | 0 |
CTCF | G2 | GSE9613 | 168122014 | 168122236 | 222 | 0 |
CTCF | G2 | GSE9613 | 168125974 | 168126186 | 212 | 0 |
CTCF | G2 | GSE9613 | 168127682 | 168127898 | 216 | 0 |
CTCF | G2 | GSE9613 | 168132111 | 168132414 | 303 | 0 |
CTCF | G2 | GSE9613 | 168138168 | 168138523 | 355 | 0 |
CTCF | G2 | GSE9613 | 168142766 | 168143018 | 252 | 0 |
CTCF | G2 | GSE9613 | 168151733 | 168151876 | 143 | 0 |
CTCF | G2 | GSE9613 | 168156587 | 168156871 | 284 | 0 |
CTCF | G2 | GSE9613 | 168165837 | 168166381 | 544 | 0 |
CTCF | G2 | GSE9613 | 168189233 | 168189636 | 403 | 0 |
CTCF | G2 | GSE9613 | 168204145 | 168204330 | 185 | 0 |
CTCF | G2 | GSE9613 | 168236902 | 168237111 | 209 | 0 |
CTCF | G2 | GSE9613 | 168256949 | 168257451 | 502 | 0 |
CTCF | G2 | GSE9613 | 168306107 | 168306322 | 215 | 0 |
CTCF | G2 | GSE9613 | 168306791 | 168307320 | 529 | 0 |
CTCF | G2 | GSE9613 | 168321585 | 168321802 | 217 | 0 |
CTCF | G2 | GSE9613 | 168347212 | 168347352 | 140 | 0 |
CTCF | G2 | GSE9613 | 168349060 | 168349280 | 220 | 0 |
CTCF | G2 | GSE9613 | 168350899 | 168351313 | 414 | 0 |
CTCF | G2 | GSE9613 | 168352225 | 168352994 | 769 | 0 |
CTCF | G2 | GSE9613 | 168359088 | 168359355 | 267 | 0 |
CTCF | G2 | GSE9613 | 168476631 | 168476810 | 179 | 0 |
CTCF | G2 | GSE9613 | 168578662 | 168579113 | 451 | 0 |
CTCF | G2 | GSE9613 | 168585423 | 168585835 | 412 | 0 |
CTCF | G2 | GSE9613 | 168625368 | 168625848 | 480 | 0 |
CTCF | G2 | GSE9613 | 168628907 | 168629192 | 285 | 0 |
CTCF | G2 | GSE9613 | 168630590 | 168630953 | 363 | 0 |
CTCF | G2 | GSE9613 | 168632383 | 168632685 | 302 | 0 |
CTCF | G2 | GSE9613 | 168646262 | 168646547 | 285 | 0 |
CTCF | G2 | GSE9613 | 168649182 | 168649583 | 401 | 0 |
CTCF | G2 | GSE9613 | 168657717 | 168658225 | 508 | 0 |
FOXA1 | MCF7 | GSE15244 | 168429395 | 168430355 | 960 | 0 |
FOXA1 | MCF7 | GSE15244 | 168499152 | 168499740 | 588 | 0 |
FOXA1 | MCF7 | GSE15244 | 168578371 | 168579640 | 1269 | 0 |
FoxA1 | MCF7 | MACSdata | 168082449 | 168082594 | 145 | 0 |
FoxA1 | MCF7 | MACSdata | 168578429 | 168578933 | 504 | 0 |
Gata2 | K562 | GSE18868 | 168173037 | 168173723 | 686 | 0 |
H3K27me3 | colorectal | cancer | 168657959 | 168658263 | 304 | 0 |
H3K27me3 | colorectal | cancer | 168658883 | 168659630 | 747 | 0 |
KLF4 | hES | GSE17917 | 168058242 | 168058397 | 155 | 0 |
Myc | K562 | GSE19551 | 168173132 | 168173610 | 478 | 0 |
NRSF | mAb | Jurkat | 168086933 | 168087199 | 266 | 0 |
NRSF-poly | Jurkat | QuESTdata | 168455074 | 168455363 | 289 | 0 |
Nanog | ES | GSE20650 | 168582755 | 168583279 | 524 | 0 |
Nanog | ES | GSE20650 | 168638811 | 168639038 | 227 | 0 |
Nanog | hES | GSE18292 | 168066243 | 168066524 | 281 | 0 |
Nanog | hES | GSE18292 | 168187187 | 168187706 | 519 | 0 |
Nanog | hES | GSE18292 | 168234266 | 168234686 | 420 | 0 |
Nanog | hES | GSE18292 | 168460167 | 168460646 | 479 | 0 |
Nanog | hES | GSE18292 | 168524007 | 168524448 | 441 | 0 |
Nanog | hES | GSE18292 | 168582809 | 168583297 | 488 | 0 |
Oct4 | ES | GSE20650 | 168531077 | 168531469 | 392 | 0 |
Oct4 | hES | GSE21916 | 168638702 | 168639018 | 316 | 0 |
P300 | T0-glioblastoma | GSE21026 | 168459543 | 168460898 | 1355 | 0 |
P300 | T30-glioblastoma | GSE21026 | 168071727 | 168072854 | 1127 | 0 |
P300 | T30-glioblastoma | GSE21026 | 168459337 | 168460977 | 1640 | 0 |
RARA | MCF7 | GSE15244 | 168429282 | 168430759 | 1477 | 0 |
RARA | MCF7 | GSE15244 | 168458185 | 168460910 | 2725 | 0 |
RARG | MCF7 | GSE15244 | 168429282 | 168430694 | 1412 | 0 |
Sox2 | hES | GSE18292 | 168187185 | 168187856 | 671 | 0 |
Sox2 | hES | GSE18292 | 168524220 | 168524451 | 231 | 0 |
Sox2 | hES | GSE18292 | 168582744 | 168583195 | 451 | 0 |
Stat6 | IL-4-hr1 | GSE17850 | 168396929 | 168397397 | 468 | 0 |
TFAP2C | MCF7 | GSE21234 | 168056676 | 168057211 | 535 | 0 |
TFAP2C | MCF7 | GSE21234 | 168058313 | 168059225 | 912 | 0 |
TFAP2C | MCF7 | GSE21234 | 168082227 | 168082676 | 449 | 0 |
TFAP2C | MCF7 | GSE21234 | 168234150 | 168234701 | 551 | 0 |
TFAP2C | MCF7 | GSE21234 | 168578424 | 168578869 | 445 | 0 |
hScc1 | Bcell | GSE12603 | 168039172 | 168039540 | 368 | 0 |
hScc1 | Bcell | GSE12603 | 168107959 | 168108283 | 324 | 0 |
hScc1 | Bcell | GSE12603 | 168334617 | 168334956 | 339 | 0 |
hScc1 | Bcell | GSE12603 | 168346913 | 168347557 | 644 | 0 |
hScc1 | Bcell | GSE12603 | 168524271 | 168524464 | 193 | 0 |
hScc1 | CdLS | GSE12603 | 168039172 | 168039540 | 368 | 0 |
hScc1 | CdLS | GSE12603 | 168066044 | 168066652 | 608 | 0 |
hScc1 | CdLS | GSE12603 | 168107930 | 168108389 | 459 | 0 |
hScc1 | CdLS | GSE12603 | 168346913 | 168347606 | 693 | 0 |
hScc1 | G2 | GSE9613 | 168039172 | 168039540 | 368 | 0 |
p130 | Senescent | GSE19898 | 168041217 | 168041426 | 209 | 0 |
Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
---|---|---|---|---|---|---|---|---|---|---|---|---|
21808 | mRNA | chr5 | 168066149 | 168080467 | 195 | mRNA | SLIT3 | chr5 | 168026036 | 168113556 | Sense/Antisense (SA) pairs | |