Annotation Detail for SMARCB1
Basic Information
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| Gene Symbol: | SMARCB1 ( BAF47,INI1,RDT,RTPS1,SNF5,SNF5L1,Sfh1p,Snr1,hSNFS ) |
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| Gene Full Name: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
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| Band: | 22q11.23 |
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| Quick Links | Entrez ID:6598; OMIM: 601607; Uniprot ID:SNF5_HUMAN; ENSEMBL ID: ENSG00000099956; HGNC ID: 11103 |
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| Relate to Another Database: |
SFARIGene;
denovo-db |
| Location(AA) |
Modification |
|---|
| 129 | Phosphoserine. |
| Location(AA) |
Modifications |
Resource |
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
- RefSeq ID: NM_001007468
- Location:chr22 22459149-22506703
- strand:+
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| H3ac |
HepG2 | E | 22458398 |
22458881 |
483 |
510 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| CTCF |
G2 | GSE9613 | 22505934 |
22506460 |
526 |
0 |
| FOXA1 |
MCF7 | GSE15244 | 22459741 |
22460165 |
424 |
0 |
| FOXA1 |
MCF7 | GSE15244 | 22461404 |
22461833 |
429 |
0 |
| H3K4me3 |
colorectal | cancer | 22459741 |
22460568 |
827 |
0 |
| H3ac |
HepG2 | E | 22459741 |
22460568 |
827 |
0 |
| Myc |
hES | GSE17917 | 22493231 |
22493460 |
229 |
0 |
| PHF8 |
HeLa | GSE20725 | 22458902 |
22459929 |
1027 |
0 |
| PHF8 |
Hs68plusFBS | GSE20725 | 22458929 |
22459990 |
1061 |
0 |
| TAF |
k562 | GSE8489 | 22459708 |
22460568 |
860 |
0 |
| hScc1 |
Bcell | GSE12603 | 22459104 |
22459619 |
515 |
0 |
| hScc1 |
Bcell | GSE12603 | 22473159 |
22473599 |
440 |
0 |
| p130 |
Quiescent | GSE19898 | 22459315 |
22459495 |
180 |
0 |
Validated miRNA targets