Annotation Detail for CAPRIN2
Basic Information
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| Gene Symbol: | CAPRIN2 ( C1QDC1,EEG-1,EEG1,FLJ11391,FLJ22569,KIAA1873,MGC102894,MGC134847,MGC134848,RNG140,caprin-2 ) |
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| Gene Full Name: | caprin family member 2 |
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| Band: | 12p11.21 |
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| Quick Links | Entrez ID:65981; OMIM: 610375; Uniprot ID:CAPR2_HUMAN; ENSEMBL ID: ENSG00000110888; HGNC ID: 21259 |
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| Relate to Another Database: |
SFARIGene;
denovo-db |
| Location(AA) |
Modification |
|---|
| 547 | Phosphoserine. |
| 554 | Phosphoserine. |
| 560 | Phosphothreonine. |
| 924 | Phosphotyrosine. |
| Location(AA) |
Modifications |
Resource |
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
- RefSeq ID: NM_032156
- Location:chr12 30753752-30798714
- strand:-
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| CTCF |
G2 | GSE9613 | 30798619 |
30799856 |
1237 |
523 |
| FOXA1 |
DLD1 | GSE12801 | 30807608 |
30808083 |
475 |
9131 |
| FOXA1 |
MCF7 | GSE15244 | 30807608 |
30807843 |
235 |
9011 |
| FoxA1 |
MCF7 | MACSdata | 30807268 |
30807704 |
436 |
8772 |
| NFkBII |
GM10847 | GSE19485 | 30798226 |
30800177 |
1951 |
487 |
| NRSF |
pAb | Jurkat | 30798503 |
30799160 |
657 |
117 |
| hScc1 |
Bcell | GSE12603 | 30798460 |
30799562 |
1102 |
297 |
| hScc1 |
CdLS | GSE12603 | 30798460 |
30799562 |
1102 |
297 |
| hScc1 |
G2 | GSE9613 | 30798535 |
30799815 |
1280 |
461 |
| p130 |
Senescent | GSE19898 | 30799297 |
30799572 |
275 |
720 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| FOXA1 |
DLD1 | GSE12801 | 30750721 |
30751063 |
342 |
2861 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
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| CBP |
T30-glioblastoma | GSE21026 | 30769754 |
30770433 |
679 |
0 |
| ER |
E2-MCF7 | GSE14664 | 30757657 |
30757696 |
39 |
0 |
| ER |
Fulvestrant-MCF7 | GSE14664 | 30757658 |
30757691 |
33 |
0 |
| H3K4me3 |
colorectal | cancer | 30797793 |
30798585 |
792 |
0 |
| H3ac |
HepG2 | E | 30793775 |
30796085 |
2310 |
0 |
| H3ac |
HepG2 | E | 30796741 |
30797448 |
707 |
0 |
| H3ac |
HepG2 | E | 30797870 |
30798585 |
715 |
0 |
| Oct1 |
Hela | GSE14283 | 30757657 |
30757694 |
37 |
0 |
| P300 |
T30-glioblastoma | GSE21026 | 30769783 |
30770341 |
558 |
0 |
| TAF |
Hela | GSE8489 | 30782104 |
30782523 |
419 |
0 |
| USF1 |
HepG2 | E | 30797870 |
30798423 |
553 |
0 |
| Micro RNA Name |
Stem Loop Name |
The chromosome that miRNA located |
Publication |
|---|
| hsa-miR-124 |
hsa-mir-124-1 |
8 |
18042700 |
| hsa-miR-124 |
hsa-mir-124-2 |
8 |
18042700 |
| hsa-miR-124 |
hsa-mir-124-3 |
20 |
18042700 |
Cis-Nats regulation