Annotation Detail for LRRC61
Basic Information Top
| Gene Symbol: | LRRC61 ( FLJ22216,FLJ31392,HSPC295,MGC3036 ) |
|---|---|
| Gene Full Name: | leucine rich repeat containing 61 |
| Band: | 7q36.1 |
| Quick Links | Entrez ID:65999; OMIM: NA; Uniprot ID:LRC61_HUMAN; ENSEMBL ID: ENSG00000127399; HGNC ID: 21704 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 126 | Phosphotyrosine(Jak) | HMM predict |
| 187 | Phosphoserine(IKK) | HMM predict |
| 188 | O-linked | HMM predict |
| 188 | Phosphoserine(CDC2) | HMM predict |
| 214 | Phosphoserine(CK1) | HMM predict |
| 214 | Phosphoserine(CK2) | HMM predict |
| 214 | Phosphoserine(IKK) | HMM predict |
| 250 | O-linked | HMM predict |
- RefSeq ID: NM_023942
- Location:chr7 149651537-149666170
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 149650075 | 149650208 | 133 | 1396 |
| CTCF | G2 | GSE9613 | 149650858 | 149651688 | 830 | 265 |
| PHF8 | HeLa | GSE20725 | 149650507 | 149652036 | 1529 | 266 |
| TAF | Hela | GSE8489 | 149640314 | 149640780 | 466 | 10991 |
| VDR | GM10855-stim | GSE22484 | 149640221 | 149641693 | 1472 | 10581 |
| hScc1 | Bcell | GSE12603 | 149650858 | 149651870 | 1012 | 174 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 149663014 | 149663881 | 867 | 0 |
| CTCF | G2 | GSE9613 | 149653068 | 149653406 | 338 | 0 |
| CTCF | G2 | GSE9613 | 149661494 | 149661819 | 325 | 0 |
| CTCF | G2 | GSE9613 | 149664522 | 149665684 | 1162 | 0 |
| H3ac | HepG2 | E | 149651870 | 149653471 | 1601 | 0 |
| Nanog | hES | GSE18292 | 149663221 | 149663420 | 199 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 149663043 | 149664493 | 1450 | 0 |
| TAF | Hela | GSE8489 | 149663583 | 149664398 | 815 | 0 |
| hScc1 | Bcell | GSE12603 | 149652595 | 149652843 | 248 | 0 |
| hScc1 | Bcell | GSE12603 | 149665164 | 149665684 | 520 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24840 | mRNA | MGC3036 | chr7 | 149458252 | 149472886 | 45 | HTC | ACTR3B | chr7 | 149378653 | 149458310 | Sense/Antisense (SA) pairs |