Annotation Detail for SMARCD3
Basic Information Top
| Gene Symbol: | SMARCD3 ( BAF60C,CRACD3,MGC111010,Rsc6p ) |
|---|---|
| Gene Full Name: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 |
| Band: | 7q36.1 |
| Quick Links | Entrez ID:6604; OMIM: 601737; Uniprot ID:SMRD3_HUMAN; ENSEMBL ID: ENSG00000082014; HGNC ID: 11108 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 178 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 178 | Phosphoserine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 14 | Phosphothreonine(PKC) | HMM predict |
| 14 | Phosphothreonine(PKA) | HMM predict |
| 48 | O-linked | HMM predict |
| 53 | Phosphoserine(CDC2) | HMM predict |
| 79 | O-linked | HMM predict |
| 83 | Phosphoserine(ATM) | HMM predict |
| 83 | Phosphoserine(IKK) | HMM predict |
| 119 | Phosphoserine(ATM) | HMM predict |
| 122 | Phosphotyrosine(INSR) | HMM predict |
| 122 | Phosphotyrosine(Syk) | HMM predict |
| 235 | O-linked | HMM predict |
| 304 | Phosphotyrosine(INSR) | HMM predict |
| 467 | Isoleucine | HMM predict |
- RefSeq ID: NM_001003801
- Location:chr7 150566992-150576681
- strand:-
| No data |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 150571348 | 150571588 | 240 | 0 |
| CTCF | G2 | GSE9613 | 150572150 | 150573959 | 1809 | 0 |
| CTCF | G2 | GSE9613 | 150576081 | 150576442 | 361 | 0 |
| hScc1 | Bcell | GSE12603 | 150572297 | 150572720 | 423 | 0 |
| p130 | Senescent | GSE19898 | 150575540 | 150575749 | 209 | 0 |
| p130 | Senescent | GSE19898 | 150576451 | 150576683 | 232 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24867 | EST | chr7 | 150375490 | 150375706 | 216 | mRNA | SMARCD3 | chr7 | 150373707 | 150411828 | Sense/Antisense (SA) pairs | |