Annotation Detail for SMARCE1
Basic Information Top
| Gene Symbol: | SMARCE1 ( BAF57 ) |
|---|---|
| Gene Full Name: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 |
| Band: | 17q21.2 |
| Quick Links | Entrez ID:6605; OMIM: 603111; Uniprot ID:SMCE1_HUMAN; ENSEMBL ID: ENSG00000073584; HGNC ID: 11109 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 265 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 6 | Phosphoserine | HMM predict |
| 12 | O-linked | HMM predict |
| 12 | O-linked | HMM predict |
| 54 | O-linked | HMM predict |
| 115 | Phosphotyrosine(Syk) | HMM predict |
| 115 | Phosphotyrosine(INSR) | HMM predict |
| 119 | Phosphotyrosine(Syk) | HMM predict |
| 170 | Phosphotyrosine(INSR) | HMM predict |
| 182 | Phosphotyrosine(Syk) | HMM predict |
| 182 | Sulfotyrosine | HMM predict |
| 208 | Phosphoserine(CK1) | HMM predict |
| 314 | Phosphoserine(ATM) | HMM predict |
| 363 | Phosphothreonine(MAPK) | HMM predict |
| 383 | Phosphoserine(CK2) | HMM predict |
| 385 | Phosphoserine(IKK) | HMM predict |
| 391 | Phosphoserine(IKK) | HMM predict |
| 395 | O-linked | HMM predict |
- RefSeq ID: NM_003079
- Location:chr17 36037507-36057628
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| PHF8 | HeLa | GSE20725 | 36056904 | 36058624 | 1720 | 136 |
| RARG | MCF7 | GSE15244 | 36058635 | 36058988 | 353 | 1183 |
| TAF | k562 | GSE8489 | 36057952 | 36059122 | 1170 | 909 |
| hScc1 | Bcell | GSE12603 | 36058103 | 36058635 | 532 | 741 |
| p130 | Quiescent | GSE19898 | 36057128 | 36058797 | 1669 | 334 |
| p130 | Senescent | GSE19898 | 36057077 | 36058645 | 1568 | 233 |
| p130 | shRbQuiescent | GSE19898 | 36056959 | 36058854 | 1895 | 278 |
| p130 | shRbSenescent | GSE19898 | 36057037 | 36058336 | 1299 | 58 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 36029730 | 36030038 | 308 | 7624 |
| CTCF | CD4 | SISSRdata | 36029730 | 36030038 | 308 | 7624 |
| CTCF | G2 | GSE9613 | 36024655 | 36025027 | 372 | 12667 |
| CTCF | G2 | GSE9613 | 36025284 | 36026076 | 792 | 11828 |
| CTCF | G2 | GSE9613 | 36029836 | 36030232 | 396 | 7474 |
| NFkBII | GM12878 | GSE19485 | 36024045 | 36026120 | 2075 | 12425 |
| NFkBII | GM18526 | GSE19485 | 36024478 | 36025969 | 1491 | 12284 |
| Oct1 | Hela | GSE14283 | 36028358 | 36028389 | 31 | 9134 |
| Oct1 | Hela | GSE14283 | 36029234 | 36029294 | 60 | 8244 |
| RARA | MCF7 | GSE15244 | 36028619 | 36029371 | 752 | 8513 |
| TFAP2C | MCF7 | GSE21234 | 36028568 | 36029091 | 523 | 8678 |
| hScc1 | Bcell | GSE12603 | 36024802 | 36025734 | 932 | 12240 |
| hScc1 | Bcell | GSE12603 | 36029836 | 36030232 | 396 | 7474 |
| hScc1 | CdLS | GSE12603 | 36024839 | 36025734 | 895 | 12221 |
| hScc1 | CdLS | GSE12603 | 36029836 | 36030232 | 396 | 7474 |
| hScc1 | G2 | GSE9613 | 36029836 | 36030232 | 396 | 7474 |
| p130 | Quiescent | GSE19898 | 36030054 | 36030227 | 173 | 7367 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 36055783 | 36059122 | 3339 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11099 | EST | chr17 | 36037496 | 36037849 | 344 | mRNA | SMARCE1 | chr17 | 36037505 | 36057629 | Sense/Antisense (SA) pairs | |