Annotation Detail for SNCB
Basic Information Top
| Gene Symbol: | SNCB ( - ) |
|---|---|
| Gene Full Name: | synuclein, beta |
| Band: | 5q35.2 |
| Quick Links | Entrez ID:6620; OMIM: 602569; Uniprot ID:SYUB_HUMAN; ENSEMBL ID: ENSG00000074317; HGNC ID: 11140 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 118 | Phosphoserine; by BARK1, CK2 and GRK5. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 118 | Phosphoserine (by BARK1, CK2 and GRK5). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 59 | Phosphothreonine(CK2) | HMM predict |
| 119 | Phosphotyrosine(EGFR) | HMM predict |
| 119 | Phosphotyrosine(INSR) | HMM predict |
| 119 | Phosphotyrosine(Abl) | HMM predict |
| 119 | Phosphotyrosine(Syk) | HMM predict |
| 119 | Sulfotyrosine | HMM predict |
| 119 | Phosphotyrosine | HMM predict |
| 127 | Phosphotyrosine(Syk) | HMM predict |
| 127 | Sulfotyrosine | HMM predict |
| 130 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_001001502
- Location:chr5 175979816-175990162
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 175997072 | 175997509 | 437 | 7128 |
| H3K27me3 | colorectal | cancer | 175990485 | 175991233 | 748 | 697 |
| H3K27me3 | colorectal | cancer | 175993302 | 175993921 | 619 | 3449 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 175978982 | 175979147 | 165 | 752 |
| CTCF | CD4 | SISSRdata | 175978982 | 175979147 | 165 | 752 |
| CTCF | G2 | GSE9613 | 175978627 | 175980374 | 1747 | 316 |
| Gata2 | K562 | GSE18868 | 175978790 | 175979317 | 527 | 763 |
| NRSF | mAb | Jurkat | 175977239 | 175978232 | 993 | 2081 |
| hScc1 | Bcell | GSE12603 | 175979070 | 175979286 | 216 | 639 |
| p130 | Senescent | GSE19898 | 175978968 | 175979241 | 273 | 712 |
| p130 | Senescent | GSE19898 | 175979391 | 175979674 | 283 | 284 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 175981120 | 175981796 | 676 | 0 |
| CTCF | G2 | GSE9613 | 175987098 | 175988038 | 940 | 0 |
| CTCF | G2 | GSE9613 | 175988864 | 175990015 | 1151 | 0 |
| H3K27me3 | colorectal | cancer | 175987523 | 175987744 | 221 | 0 |
| hScc1 | Bcell | GSE12603 | 175989225 | 175990015 | 790 | 0 |
Validated miRNA targets