AutismKB 2.0

Annotation Detail for SNTB1


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Basic Information Top
Gene Symbol:SNTB1 ( 59-DAP,A1B,BSYN2,DAPA1B,FLJ22442,MGC111389,SNT2,SNT2B1,TIP-43 )
Gene Full Name: syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
Band: 8q24.12
Quick LinksEntrez ID:6641; OMIM: 600026; Uniprot ID:SNTB1_HUMAN; ENSEMBL ID: ENSG00000172164; HGNC ID: 11168
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
87Phosphoserine.
214Phosphothreonine (By similarity).
219Phosphoserine.
236Phosphoserine (By similarity).
389Phosphoserine.
Location(AA) Modifications Resource
2N-acetylalanine.Swiss-Prot 53.0
214Phosphothreonine (By similarity).Swiss-Prot 53.0
219Phosphoserine (By similarity).Swiss-Prot 53.0
236Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
49Phosphoserine(CK1)HMM predict
65N-linkedHMM predict
87Phosphoserine(CDC2)HMM predict
200Phosphotyrosine(Jak)HMM predict
205Phosphoserine(CDC2)HMM predict
225O-linkedHMM predict
227Phosphoserine(ATM)HMM predict
269Phosphoserine(MAPK)HMM predict
283Phosphoserine(IKK)HMM predict
356Phosphotyrosine(INSR)HMM predict
389Phosphoserine(CDC2)HMM predict
417Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021021
  • Location:chr8 121619226-121893909
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 121893683 121895501 1818 683
NRSF pAbJurkat 121909266 121909526 260 15487
Oct1 HelaGSE14283 121906166 121906196 30 12272
USF2 HepG2E 121908662 121909873 1211 15358
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 121735459 121736696 1237 0
CTCF CD4GSE12889 121783459 121783772 313 0
CTCF CD4GSE12889 121890069 121890447 378 0
CTCF CD4SISSRdata 121783459 121783772 313 0
CTCF CD4SISSRdata 121890069 121890447 378 0
ER E2-MCF7GSE14664 121665830 121665862 32 0
ER E2-MCF7GSE14664 121669448 121669482 34 0
FOXA1 DLD1GSE12801 121735495 121736399 904 0
FOXA1 DLD1GSE12801 121792695 121793268 573 0
FOXA1 DLD1GSE12801 121856424 121857208 784 0
FOXA1 DLD1GSE12801 121858235 121859936 1701 0
FOXA1 DLD1GSE12801 121890749 121892043 1294 0
FOXA1 MCF7GSE15244 121685103 121685529 426 0
FOXA1 MCF7GSE15244 121735724 121736143 419 0
FOXA1 MCF7GSE15244 121768688 121769635 947 0
FOXA1 MCF7GSE15244 121859093 121859869 776 0
FOXA1 MCF7GSE15244 121891041 121892562 1521 0
GATA3 MCF7GSE15244 121712555 121713028 473 0
H3K4me2 HCT116GSE10453 121891483 121892253 770 0
H3K4me3 colorectalcancer 121891483 121892322 839 0
H3ac HepG2E 121818688 121819054 366 0
H3ac HepG2E 121859936 121860255 319 0
H3ac HepG2E 121889837 121892598 2761 0
KLF4 hESGSE17917 121892540 121893182 642 0
Myc hESGSE17917 121697009 121697356 347 0
Myc hESGSE17917 121844579 121844959 380 0
NRSF pAbJurkat 121893611 121893949 338 0
Nanog ESGSE20650 121634350 121634598 248 0
Nanog hESGSE18292 121706864 121707292 428 0
Nanog hESGSE18292 121722615 121723006 391 0
Oct1 H2O2-HelaGSE14283 121619333 121619362 29 0
Oct1 H2O2-HelaGSE14283 121621552 121621586 34 0
Oct1 H2O2-HelaGSE14283 121644080 121644107 27 0
Oct1 H2O2-HelaGSE14283 121733197 121733235 38 0
Oct1 H2O2-HelaGSE14283 121856341 121856369 28 0
Oct1 HelaGSE14283 121675822 121675860 38 0
Oct1 HelaGSE14283 121716689 121716722 33 0
Oct1 HelaGSE14283 121733198 121733241 43 0
Oct1 HelaGSE14283 121753925 121754001 76 0
Oct1 HelaGSE14283 121826385 121826457 72 0
Oct4 hESGSE17917 121744272 121744502 230 0
P300 T0-glioblastomaGSE21026 121735418 121736887 1469 0
P300 T30-glioblastomaGSE21026 121666527 121667320 793 0
P300 T30-glioblastomaGSE21026 121735363 121736707 1344 0
P300 T30-glioblastomaGSE21026 121861504 121862365 861 0
P300 T30-glioblastomaGSE21026 121866842 121867835 993 0
RARG MCF7GSE15244 121685103 121685648 545 0
RARG MCF7GSE15244 121891332 121892146 814 0
TFAP2C MCF7GSE21234 121686959 121687498 539 0
TFAP2C MCF7GSE21234 121766592 121767281 689 0
USF2 HepG2E 121891077 121892424 1347 0
hScc1 BcellGSE12603 121783471 121783985 514 0
hScc1 BcellGSE12603 121889837 121890322 485 0
hScc1 BcellGSE12603 121892598 121893873 1275 0
hScc1 CdLSGSE12603 121687096 121687303 207 0
hScc1 CdLSGSE12603 121889837 121890789 952 0
p130 shRbQuiescentGSE19898 121735870 121736392 522 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25891 EST chr8 121600123 121623386 286 mRNA SNTB1 chr8 121619225 121893910Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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