Annotation Detail for SNX2
Basic Information Top
| Gene Symbol: | SNX2 ( MGC5204,TRG-9 ) |
|---|---|
| Gene Full Name: | sorting nexin 2 |
| Band: | 5q23.2 |
| Quick Links | Entrez ID:6643; OMIM: 605929; Uniprot ID:SNX2_HUMAN; ENSEMBL ID: ENSG00000205302; HGNC ID: 11173 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 119 | Phosphoserine. | |
| 185 | Phosphoserine. | |
| 277 | Phosphoserine. | |
| 447 | N6-acetyllysine. | |
| 469 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 119 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 277 | Phosphoserine. | Swiss-Prot 53.0 |
| 277 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 34 | O-linked | HMM predict |
| 38 | Phosphoserine(CDC2) | HMM predict |
| 38 | Phosphoserine(ATM) | HMM predict |
| 38 | Phosphoserine(IKK) | HMM predict |
| 40 | O-linked | HMM predict |
| 40 | Phosphoserine(IKK) | HMM predict |
| 40 | Phosphoserine(CK1) | HMM predict |
| 41 | Phosphoserine(CDC2) | HMM predict |
| 41 | Phosphoserine(ATM) | HMM predict |
| 46 | Phosphoserine(MAPK) | HMM predict |
| 85 | Phosphoserine(CDC2) | HMM predict |
| 97 | O-linked | HMM predict |
| 97 | Phosphoserine(CDC2) | HMM predict |
| 101 | O-linked | HMM predict |
| 104 | Phosphothreonine(MAPK) | HMM predict |
| 104 | O-linked | HMM predict |
| 106 | O-linked | HMM predict |
| 117 | Phosphoserine(IKK) | HMM predict |
| 165 | Phosphothreonine(PKC) | HMM predict |
| 228 | Phosphoserine(CK1) | HMM predict |
| 300 | N-linked | HMM predict |
| 365 | Phosphoserine(ATM) | HMM predict |
| 365 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_003100
- Location:chr5 122138648-122193698
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 122125214 | 122125261 | 47 | 13411 |
| Oct1 | H2O2-Hela | GSE14283 | 122125224 | 122125254 | 30 | 13410 |
| Oct1 | Hela | GSE14283 | 122125224 | 122125254 | 30 | 13410 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 122142815 | 122142852 | 37 | 0 |
| H3ac | HepG2 | E | 122138909 | 122139780 | 871 | 0 |
| Nanog | ES | GSE20650 | 122180340 | 122180728 | 388 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 122150417 | 122150444 | 27 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 122155146 | 122155174 | 28 | 0 |
| Oct1 | Hela | GSE14283 | 122155146 | 122155179 | 33 | 0 |
| Oct1 | Hela | GSE14283 | 122157405 | 122157485 | 80 | 0 |
| PHF8 | 293T | GSE20725 | 122138191 | 122139289 | 1098 | 0 |
| PHF8 | HeLa | GSE20725 | 122138300 | 122139202 | 902 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 122138186 | 122139280 | 1094 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 122138176 | 122139535 | 1359 | 0 |
| TAF | Hela | GSE8489 | 122165297 | 122166356 | 1059 | 0 |
| USF1 | HepG2 | E | 122138737 | 122139630 | 893 | 0 |
| hScc1 | Bcell | GSE12603 | 122138666 | 122139048 | 382 | 0 |
Validated miRNA targets