AutismKB 2.0

Annotation Detail for BNIP3L


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Basic Information Top
Gene Symbol:BNIP3L ( BNIP3a,NIX )
Gene Full Name: BCL2/adenovirus E1B 19kDa interacting protein 3-like
Band: 8p21.2
Quick LinksEntrez ID:665; OMIM: 605368; Uniprot ID:BNI3L_HUMAN; ENSEMBL ID: ENSG00000104765; HGNC ID: 1085
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
62Phosphoserine (By similarity).
63Phosphoserine (By similarity).
117Phosphoserine (By similarity).
118Phosphoserine (By similarity).
120Phosphoserine.
Location(AA) Modifications Resource
62Phosphoserine (By similarity).Swiss-Prot 53.0
63Phosphoserine (By similarity).Swiss-Prot 53.0
117Phosphoserine (By similarity).Swiss-Prot 53.0
120Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
33N-linkedHMM predict
42N-linkedHMM predict
45N-linkedHMM predict
47N-linkedHMM predict
62Phosphoserine(CK1)HMM predict
65Phosphoserine(CK1)HMM predict
87O-linkedHMM predict
91Phosphoserine(PKB)HMM predict
91Phosphoserine(IKK)HMM predict
95Phosphoserine(IKK)HMM predict
95Phosphoserine(CDC2)HMM predict
95Phosphoserine(CDK)HMM predict
117Phosphoserine(CK2)HMM predict
118PhosphoserineHMM predict
118Phosphoserine(ATM)HMM predict
118Phosphoserine(CK2)HMM predict
120Phosphoserine(CK2)HMM predict
120Phosphoserine(CK1)HMM predict
166Phosphoserine(CAMK2)HMM predict
213Phosphothreonine(PKA)HMM predict
213Phosphothreonine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004331
  • Location:chr8 26296439-26326560
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 Hs68minusFBSGSE20725 26295740 26296780 1040 180
USF1 HepG2E 26293642 26294071 429 2583
USF1 HepG2E 26295327 26296647 1320 453
USF2 HepG2E 26295597 26296521 924 381
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 26296280 26297368 1088 0
FOXA1 MCF7GSE15244 26323349 26324073 724 0
Gata1 K562GSE18868 26304408 26304930 522 0
Gata2 K562GSE18868 26304460 26304941 481 0
H3K4me3 colorectalcancer 26297516 26297957 441 0
H3ac HepG2E 26297339 26297957 618 0
Myc K562GSE19551 26304417 26304915 498 0
NRSF pAbJurkat 26296309 26296619 310 0
TAF HelaGSE8489 26297256 26297957 701 0
TFAP2C MCF7GSE21234 26322768 26323247 479 0
USF1 HepG2E 26297256 26297957 701 0
hScc1 BcellGSE12603 26296242 26296647 405 0
hScc1 BcellGSE12603 26297145 26297592 447 0
hScc1 G2GSE9613 26296093 26297481 1388 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7c hsa-let-7c 21 20018759
hsa-let-7c* hsa-let-7c 21 20018759
hsa-miR-21 hsa-mir-21 17 20018759
hsa-miR-21* hsa-mir-21 17 20018759
hsa-miR-211 hsa-mir-211 15 20018759
hsa-miR-221 hsa-mir-221 X 20018759
hsa-miR-221* hsa-mir-221 X 20018759
hsa-miR-222 hsa-mir-222 X 20018759
hsa-miR-222* hsa-mir-222 X 20018759
hsa-miR-34a hsa-mir-34a 1 20018759
hsa-miR-34a* hsa-mir-34a 1 20018759
hsa-miR-519a hsa-mir-519a-1 19 20018759
hsa-miR-519a hsa-mir-519a-2 19 20018759
hsa-miR-93 hsa-mir-93 7 20018759
hsa-miR-93* hsa-mir-93 7 20018759
hsa-miR-96 hsa-mir-96 7 20018759
hsa-miR-96* hsa-mir-96 7 20018759
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25206 mRNA BNIP3L chr8 26296439 26326561 410 EST chr8 26324714 26325124Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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