AutismKB 2.0

Annotation Detail for SSBP1


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Basic Information Top
Gene Symbol:SSBP1 ( Mt-SSB,SOSS-B1,SSBP,mtSSB )
Gene Full Name: single-stranded DNA binding protein 1
Band: 7q34
Quick LinksEntrez ID:6742; OMIM: 600439; Uniprot ID:SSBP_HUMAN; ENSEMBL ID: ENSG00000106028; HGNC ID: 11317
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
79Phosphoserine.
113N6-acetyllysine.
Location(AA) Modifications Resource
36O-linkedOGlycBase6.0
380N-likedOGlycBase6.0
396N-likedOGlycBase6.0
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003143
  • Location:chr7 141084644-141096725
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Myc hESGSE17917 141084447 141084732 285 55
hScc1 BcellGSE12603 141084318 141084943 625 14
hScc1 CdLSGSE12603 141084318 141084837 519 67
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 141101315 141101435 120 4650
CTCF CD4SISSRdata 141101315 141101435 120 4650
ER E2-MCF7GSE14664 141100838 141100873 35 4130
Nanog ESGSE20650 141097574 141097891 317 1007
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 141084318 141085119 801 0
GABP k562GSE8489 141084318 141086063 1745 0
H3K4me3 colorectalcancer 141084635 141085752 1117 0
H3ac HepG2E 141084486 141086937 2451 0
Oct1 H2O2-HelaGSE14283 141094327 141094356 29 0
Oct1 HelaGSE14283 141094328 141094356 28 0
P300 T30-glioblastomaGSE21026 141084034 141085339 1305 0
PHF8 Hs68minusFBSGSE20725 141084040 141085293 1253 0
PHF8 Hs68plusFBSGSE20725 141084115 141085186 1071 0
TAF HelaGSE8489 141084318 141085819 1501 0
TAF k562GSE8489 141084318 141086063 1745 0
p130 shRbQuiescentGSE19898 141084497 141084870 373 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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