Annotation Detail for SSR4
Basic Information Top
| Gene Symbol: | SSR4 ( TRAPD ) |
|---|---|
| Gene Full Name: | signal sequence receptor, delta (translocon-associated protein delta) |
| Band: | Xq28 |
| Quick Links | Entrez ID:6748; OMIM: 300090; Uniprot ID:SSRD_HUMAN; ENSEMBL ID: ENSG00000180879; HGNC ID: 11326 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 38 | O-linked | HMM predict |
| 38 | Phosphothreonine(PKC) | HMM predict |
| 113 | Phosphoserine(CK1) | HMM predict |
| 173 | Alanine | HMM predict |
- RefSeq ID: NM_006280
- Location:chrX 152713287-152717146
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 152717398 | 152717618 | 220 | 362 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 152714099 | 152714292 | 193 | 0 |
| CTCF | G2 | GSE9613 | 152715957 | 152716822 | 865 | 0 |
| hScc1 | G2 | GSE9613 | 152713413 | 152713702 | 289 | 0 |
| hScc1 | G2 | GSE9613 | 152715130 | 152715477 | 347 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28304 | HTC | SSR4 | chrX | 152579817 | 152584800 | 267 | mRNA | IDH3G | chrX | 152572067 | 152580814 | Sense/Antisense (SA) pairs |