AutismKB 2.0

Annotation Detail for SSRP1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:SSRP1 ( FACT,FACT80,T160 )
Gene Full Name: structure specific recognition protein 1
Band: 11q12.1
Quick LinksEntrez ID:6749; OMIM: 604328; Uniprot ID:SSRP1_HUMAN; ENSEMBL ID: ENSG00000149136; HGNC ID: 11327
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
33N6-acetyllysine.
90N6-acetyllysine.
170Phosphothreonine.
233N6-acetyllysine.
311Phosphotyrosine.
413N6-acetyllysine.
437Phosphoserine.
441Phosphotyrosine (By similarity).
444Phosphoserine.
510Phosphoserine; by CK2 (Probable).
554Phosphotyrosine.
561Phosphoserine.
657Phosphoserine.
659Phosphoserine.
667Phosphoserine.
668Phosphoserine.
671Phosphoserine.
672Phosphoserine.
673Phosphoserine.
688Phosphoserine; by CK2 (Probable).
Location(AA) Modifications Resource
311Phosphotyrosine.Swiss-Prot 53.0
441Phosphotyrosine (By similarity).Swiss-Prot 53.0
444Phosphoserine.Swiss-Prot 53.0
444PhosphoserinePhospho.ELM 6.0
510Phosphoserine (by CK2) (Probable).Swiss-Prot 53.0
510Phosphoserine (CK2 alpha)Phospho.ELM 6.0
554PhosphotyrosinePhospho.ELM 6.0
554Phosphotyrosine.Swiss-Prot 53.0
561PhosphoserinePhospho.ELM 6.0
561Phosphoserine.Swiss-Prot 53.0
657Phosphoserine (by CK2) (Probable).Swiss-Prot 53.0
667Phosphoserine.Swiss-Prot 53.0
667PhosphoserinePhospho.ELM 6.0
668PhosphoserinePhospho.ELM 6.0
668Phosphoserine.Swiss-Prot 53.0
671PhosphoserinePhospho.ELM 6.0
671Phosphoserine.Swiss-Prot 53.0
672PhosphoserinePhospho.ELM 6.0
672Phosphoserine.Swiss-Prot 53.0
673Phosphoserine.Swiss-Prot 53.0
688Phosphoserine (CK2 alpha)Phospho.ELM 6.0
688Phosphoserine (by CK2) (Probable).Swiss-Prot 53.0
Location(AA) Modification Resource
72Phosphotyrosine(Abl)HMM predict
135N-linkedHMM predict
137Phosphoserine(IKK)HMM predict
336Phosphoserine(IKK)HMM predict
435N-linkedHMM predict
438SulfotyrosineHMM predict
441Phosphotyrosine(Syk)HMM predict
441SulfotyrosineHMM predict
444PhosphoserineHMM predict
444Phosphoserine(CK1)HMM predict
444Phosphoserine(CK2)HMM predict
452Phosphotyrosine(Syk)HMM predict
452Phosphotyrosine(Jak)HMM predict
468N-linkedHMM predict
471Phosphoserine(CK1)HMM predict
471Phosphoserine(ATM)HMM predict
474Phosphoserine(IKK)HMM predict
474Phosphoserine(CK2)HMM predict
474Phosphoserine(CK1)HMM predict
474Phosphoserine(ATM)HMM predict
498N-linkedHMM predict
500O-linkedHMM predict
503Phosphoserine(CK1)HMM predict
505Phosphoserine(CK1)HMM predict
531Phosphoserine(PKC)HMM predict
559N-linkedHMM predict
607Phosphotyrosine(Syk)HMM predict
607SulfotyrosineHMM predict
642Phosphothreonine(CDC2)HMM predict
644O-linkedHMM predict
651Phosphoserine(CK1)HMM predict
657Phosphoserine(CAMK2)HMM predict
667Phosphoserine(CK2)HMM predict
668Phosphoserine(CK2)HMM predict
671Phosphoserine(CK1)HMM predict
671Phosphoserine(CK2)HMM predict
672Phosphoserine(CK1)HMM predict
673Phosphoserine(CK2)HMM predict
673Phosphoserine(CK1)HMM predict
685Phosphoserine(CAMK2)HMM predict
685Phosphoserine(PKA)HMM predict
685Phosphoserine(PKG)HMM predict
685Phosphoserine(PKA)HMM predict
685PhosphoserineHMM predict
685Phosphoserine(CK2)HMM predict
685Phosphoserine(PKB)HMM predict
688Phosphoserine(CK2)HMM predict
688Phosphoserine(CK1)HMM predict
688PhosphoserineHMM predict
695O-linkedHMM predict
696PhosphothreonineHMM predict
696Phosphothreonine(CDK)HMM predict
696Phosphothreonine(MAPK)HMM predict
703Phosphoserine(CK1)HMM predict
703Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003146
  • Location:chr11 56850035-56859926
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 56859877 56860155 278 90
CTCF CD4SISSRdata 56859877 56860155 278 90
ETS1 JurkatGSE17954 56859662 56860317 655 63
H3ac HepG2E 56859914 56861023 1109 542
Rb QuiescentGSE19898 56859836 56860082 246 33
TAF HelaGSE8489 56860195 56861023 828 683
TAFII hESGSE17917 56859819 56860114 295 40
p130 QuiescentGSE19898 56859850 56860195 345 96
p130 SenescentGSE19898 56859671 56860238 567 28
p130 shRbQuiescentGSE19898 56859608 56860672 1064 214
p130 shRbSenescentGSE19898 56859853 56860053 200 27
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TAF HelaGSE8489 56848781 56850494 1713 398
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me2 HCT116GSE10453 56858267 56859076 809 0
H3K4me3 colorectalcancer 56858233 56859181 948 0
H3ac HepG2E 56849326 56851585 2259 0
H3ac HepG2E 56852422 56853135 713 0
H3ac HepG2E 56853870 56854409 539 0
H3ac HepG2E 56857076 56857893 817 0
H3ac HepG2E 56858233 56859356 1123 0
Myc K562GSE19551 56859290 56860332 1042 0
Rb GrowingGSE19898 56859826 56860008 182 0
Rb QuiescentGSE19898 56859057 56859234 177 0
Rb SenescentGSE19898 56859388 56859705 317 0
Rb SenescentGSE19898 56859740 56860072 332 0
Rb shRbSenescenceGSE19898 56859751 56860037 286 0
p130 shRbSenescentGSE19898 56859436 56859828 392 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4490 EST chr11 56849652 56852010 140 mRNA SSRP1 chr11 56850035 56859927Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved