Annotation Detail for SST

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	SST ( SMST )
Gene Full Name:	somatostatin
Band:	3q27.3
Quick Links	Entrez ID:6750; OMIM: 182450; Uniprot ID:SMS_HUMAN; ENSEMBL ID: ENSG00000157005; HGNC ID: 11329
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:6 results

No data

Location(AA)	Modification	Resource
58	Phosphoserine(CK1)	HMM predict
61	N-linked	HMM predict
65	N-linked	HMM predict
74	Phosphoserine(ATM)	HMM predict
92	Phosphoserine(IKK)	HMM predict
107	Asparagine	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001048
Location:chr3 188869389-188870894
strand:-

Upstream the gene:13 results
Downstream the gene:1 results
Inside the gene:6 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	188880065	188880510	445	9393
CTCF	CD4	SISSRdata	188880065	188880510	445	9393
CTCF	G2	GSE9613	188879203	188880894	1691	9154
H3K27me3	colorectal	cancer	188870905	188871505	600	311
Myc	K562	GSE19551	188880120	188880471	351	9401
NRSF	mAb	Jurkat	188867962	188875803	7841	988
RARA	MCF7	GSE15244	188879597	188880370	773	9089
RARG	MCF7	GSE15244	188879562	188880370	808	9072
Rb	Growing	GSE19898	188879549	188879826	277	8793
hScc1	Bcell	GSE12603	188879274	188880407	1133	8946
hScc1	CdLS	GSE12603	188879203	188880407	1204	8911
hScc1	G2	GSE9613	188879238	188880699	1461	9074
p130	Senescent	GSE19898	188880121	188880473	352	9403

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
NRSF	mAb	Jurkat	188863665	188867640	3975	3737

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	188870391	188871213	822	0
KLF4	hES	GSE17917	188870672	188870935	263	0
NRSF	Jurkat	GSE13047	188869461	188871527	2066	0
NRSF	Jurkat	SISSRdata	188869976	188870907	931	0
NRSF-mono	Jurkat	QuESTdata	188869557	188870955	1398	0
NRSF-poly	Jurkat	QuESTdata	188869461	188871515	2054	0

Validated miRNA targets

miR Walk:2 results
Tarbase V5.0:0 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-195	hsa-mir-195	17	19121517
hsa-miR-195*	hsa-mir-195	17	19121517

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved