Annotation Detail for SSX2
Basic Information Top
| Gene Symbol: | SSX2 ( CT5.2a,HD21,HOM-MEL-40,MGC119055,MGC15364,MGC3884,SSX,SSX2B ) |
|---|---|
| Gene Full Name: | synovial sarcoma, X breakpoint 2 |
| Band: | Xp11.22 |
| Quick Links | Entrez ID:6757; OMIM: 300192; Uniprot ID:SSX2_HUMAN; ENSEMBL ID: ENSG00000187754,ENSG00000241476; HGNC ID: 11336 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 12 | Phosphothreonine(PKA) | HMM predict |
| 12 | Phosphothreonine(PKC) | HMM predict |
| 121 | N-linked | HMM predict |
| 147 | Phosphothreonine(PKC) | HMM predict |
| 181 | Phosphoserine(CK2) | HMM predict |
- RefSeq ID: NM_003147
- Location:chrX 52797032-52807341
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 52783424 | 52783453 | 29 | 13594 |
| hScc1 | G2 | GSE9613 | 52777593 | 52777794 | 201 | 19339 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 52816773 | 52817021 | 248 | 9556 |
| CTCF | G2 | GSE9613 | 52824333 | 52824850 | 517 | 17250 |
| NRSF | mAb | Jurkat | 52807899 | 52809376 | 1477 | 1296 |
| Oct1 | Hela | GSE14283 | 52807672 | 52807707 | 35 | 348 |
| Oct1 | Hela | GSE14283 | 52810553 | 52810644 | 91 | 3257 |
| hScc1 | Bcell | GSE12603 | 52808690 | 52809073 | 383 | 1540 |
| hScc1 | Bcell | GSE12603 | 52816847 | 52817021 | 174 | 9593 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 52798397 | 52798771 | 374 | 0 |
| NRSF | mAb | Jurkat | 52805846 | 52807554 | 1708 | 0 |
| hScc1 | G2 | GSE9613 | 52798431 | 52798700 | 269 | 0 |
Validated miRNA targets