AutismKB 2.0

Annotation Detail for ZFP36L1


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Basic Information Top
Gene Symbol:ZFP36L1 ( BRF1,Berg36,ERF-1,ERF1,RNF162B,TIS11B,cMG1 )
Gene Full Name: zinc finger protein 36, C3H type-like 1
Band: 14q24.1
Quick LinksEntrez ID:677; OMIM: 601064; Uniprot ID:TISB_HUMAN; ENSEMBL ID: ENSG00000185650; HGNC ID: 1107
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
54Phosphoserine (By similarity).
92Phosphoserine (By similarity).
334Phosphoserine.
Location(AA) Modifications Resource
54Phosphoserine (By similarity).Swiss-Prot 53.0
92Phosphoserine (By similarity).Swiss-Prot 53.0
92Phosphoserine (PKB
Location(AA) Modification Resource
25N-linkedHMM predict
54Phosphoserine(IKK)HMM predict
54Phosphoserine(PKG)HMM predict
56Phosphothreonine(PKA)HMM predict
92Phosphoserine(CK1)HMM predict
111N-linkedHMM predict
146Phosphoserine(CK1)HMM predict
209O-linkedHMM predict
213O-linkedHMM predict
222O-linkedHMM predict
222Phosphoserine(CDC2)HMM predict
225O-linkedHMM predict
227Phosphothreonine(MAPK)HMM predict
227O-linkedHMM predict
240Phosphoserine(CDC2)HMM predict
294Phosphoserine(CDC2)HMM predict
298Phosphoserine(CK1)HMM predict
300Phosphoserine(CK2)HMM predict
300Phosphoserine(ATM)HMM predict
300Phosphoserine(CK1)HMM predict
305Phosphotyrosine(Syk)HMM predict
311Phosphoserine(CK1)HMM predict
314Phosphoserine(CK1)HMM predict
314Phosphoserine(IKK)HMM predict
318Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004926
  • Location:chr14 68324127-68329537
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 68329323 68330291 968 270
p130 QuiescentGSE19898 68329363 68330268 905 278
p130 shRbQuiescentGSE19898 68329601 68330334 733 430
p130 shRbSenescentGSE19898 68329266 68330274 1008 233
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 68307073 68307245 172 16969
H3ac HepG2E 68316041 68316808 767 7703
H3ac HepG2E 68317769 68318178 409 6154
NFkBII GM12878GSE19485 68320494 68321933 1439 2914
P300 T0-glioblastomaGSE21026 68310911 68311606 695 12869
P300 T30-glioblastomaGSE21026 68311103 68311973 870 12590
RARA MCF7GSE15244 68316112 68316662 550 7741
RARA MCF7GSE15244 68320309 68321249 940 3349
RARA MCF7GSE15244 68321687 68322662 975 1953
RARA MCF7GSE15244 68322942 68323802 860 756
RARG MCF7GSE15244 68315355 68315707 352 8597
RARG MCF7GSE15244 68320309 68321249 940 3349
RARG MCF7GSE15244 68321687 68323976 2289 1296
TFAP2C MCF7GSE21234 68311085 68311610 525 12780
USF1 HepG2E 68316041 68316808 767 7703
USF2 HepG2E 68316041 68316808 767 7703
hScc1 BcellGSE12603 68317661 68317920 259 6337
p130 shRbSenescentGSE19898 68316518 68316816 298 7461
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 68327112 68327921 809 0
H3K4me3 colorectalcancer 68328171 68329157 986 0
H3ac HepG2E 68325568 68326338 770 0
H3ac HepG2E 68326661 68329806 3145 0
NFkBII GM18505GSE19485 68326911 68330383 3472 0
Oct1 H2O2-HelaGSE14283 68325912 68325944 32 0
Oct1 HelaGSE14283 68325913 68325943 30 0
Oct1 HelaGSE14283 68329456 68329498 42 0
Pol2 GM12878GSE19551 68324853 68333067 8214 0
PolII HeLaGSE12783 68322285 68333489 11204 0
RARA MCF7GSE15244 68327857 68329313 1456 0
RARG MCF7GSE15244 68327041 68327553 512 0
RARG MCF7GSE15244 68327857 68329313 1456 0
hScc1 BcellGSE12603 68325326 68325814 488 0
hScc1 BcellGSE12603 68326923 68327262 339 0
hScc1 CdLSGSE12603 68324989 68326761 1772 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-29b hsa-mir-29b-1 7 19801654
hsa-miR-29b hsa-mir-29b-2 1 19801654
hsa-miR-29b hsa-mir-29b-1 7 19801654
hsa-miR-29b hsa-mir-29b-2 1 19801654
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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