Annotation Detail for SYP


Gene Symbol: | SYP ( MRXSYP ) |
---|---|
Gene Full Name: | synaptophysin |
Band: | Xp11.23 |
Quick Links | Entrez ID:6855; OMIM: 313475; Uniprot ID:SYPH_HUMAN; ENSEMBL ID: ENSG00000102003; HGNC ID: 11506 |
Relate to Another Database: | SFARIGene; denovo-db |
Location(AA) | Modification | |
---|---|---|
59 | N-linked (GlcNAc...) (Potential). | |
81 | Phosphotyrosine (By similarity). |
Location(AA) | Modifications | Resource |
---|---|---|
59 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
Location(AA) | Modification | Resource |
---|---|---|
59 | N-linked | HMM predict |
66 | Phosphoserine | HMM predict |
66 | Phosphoserine(CK1) | HMM predict |
262 | Phosphotyrosine(INSR) | HMM predict |
278 | Phosphotyrosine(INSR) | HMM predict |
278 | Sulfotyrosine | HMM predict |
287 | O-linked | HMM predict |
289 | Phosphotyrosine(INSR) | HMM predict |
300 | Tyrosine | HMM predict |
308 | Phosphoserine(IKK) | HMM predict |
- RefSeq ID: NM_003179
- Location:chrX 48931208-48943604
- strand:-
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CTCF | G2 | GSE9613 | 48943434 | 48943835 | 401 | 30 |
P300 | T0-glioblastoma | GSE21026 | 48943478 | 48944169 | 691 | 219 |
PHF8 | HeLa | GSE20725 | 48943314 | 48944054 | 740 | 80 |
Rb | Growing | GSE19898 | 48943480 | 48943773 | 293 | 22 |
p130 | Senescent | GSE19898 | 48943689 | 48943988 | 299 | 234 |
p130 | shRbQuiescent | GSE19898 | 48943700 | 48944201 | 501 | 346 |
No data |
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CTCF | Jurkat | GSE12889 | 48936140 | 48936414 | 274 | 0 |
CTCF | G2 | GSE9613 | 48930949 | 48931788 | 839 | 0 |
CTCF | G2 | GSE9613 | 48934231 | 48934417 | 186 | 0 |
CTCF | G2 | GSE9613 | 48936495 | 48936838 | 343 | 0 |
CTCF | G2 | GSE9613 | 48942140 | 48942662 | 522 | 0 |
ETS1 | Jurkat | GSE17954 | 48934081 | 48935165 | 1084 | 0 |
KLF4 | hES | GSE17917 | 48935181 | 48935378 | 197 | 0 |
NRSF | Jurkat | GSE13047 | 48943057 | 48944016 | 959 | 0 |
NRSF | mAb | Jurkat | 48939687 | 48940381 | 694 | 0 |
NRSF | mAb | Jurkat | 48940688 | 48941393 | 705 | 0 |
NRSF-mono | Jurkat | QuESTdata | 48942752 | 48943881 | 1129 | 0 |
NRSF-poly | Jurkat | QuESTdata | 48943009 | 48943873 | 864 | 0 |
P300 | T30-glioblastoma | GSE21026 | 48933996 | 48935306 | 1310 | 0 |
PHF8 | HeLa | GSE20725 | 48934603 | 48935266 | 663 | 0 |
TFAP2C | MCF7 | GSE21234 | 48934106 | 48935121 | 1015 | 0 |
hScc1 | Bcell | GSE12603 | 48934231 | 48934417 | 186 | 0 |
hScc1 | G2 | GSE9613 | 48930906 | 48931788 | 882 | 0 |
hScc1 | G2 | GSE9613 | 48934231 | 48934529 | 298 | 0 |
hScc1 | G2 | GSE9613 | 48936495 | 48936693 | 198 | 0 |
hScc1 | G2 | GSE9613 | 48942113 | 48942468 | 355 | 0 |
Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
---|---|---|---|---|---|---|---|---|---|---|---|---|
27634 | EST | chrX | 48811795 | 48815284 | 66 | mRNA | SYP | chrX | 48800635 | 48813032 | Sense/Antisense (SA) pairs | |