AutismKB 2.0

Annotation Detail for SYT4


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Basic Information Top
Gene Symbol:SYT4 ( HsT1192,KIAA1342 )
Gene Full Name: synaptotagmin IV
Band: 18q12.3
Quick LinksEntrez ID:6860; OMIM: 600103; Uniprot ID:SYT4_HUMAN; ENSEMBL ID: ENSG00000132872; HGNC ID: 11512
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
6Phosphothreonine(PKC)HMM predict
38S-palmitoylHMM predict
43Phosphoserine(PKG)HMM predict
45Phosphoserine(IKK)HMM predict
46N-linkedHMM predict
48Phosphothreonine(CDC2)HMM predict
120N-linkedHMM predict
133Phosphoserine(PKG)HMM predict
135Phosphoserine(MAPK)HMM predict
138O-linkedHMM predict
141Phosphoserine(CK1)HMM predict
144Phosphoserine(CK1)HMM predict
144Phosphoserine(IKK)HMM predict
187Phosphoserine(IKK)HMM predict
190Phosphoserine(ATM)HMM predict
193Phosphotyrosine(INSR)HMM predict
193Phosphotyrosine(Jak)HMM predict
226SulfotyrosineHMM predict
301O-linkedHMM predict
326Phosphotyrosine(Jak)HMM predict
343Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020783
  • Location:chr18 39101854-39111341
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 39119494 39119590 96 8201
Oct1 HelaGSE14283 39112540 39112577 37 1217
Oct1 HelaGSE14283 39128022 39128058 36 16699
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF JurkatGSE13047 39110945 39111661 716 0
NRSF mAbJurkat 39110717 39111429 712 0
NRSF-mono JurkatQuESTdata 39111024 39111654 630 0
NRSF-poly JurkatQuESTdata 39111075 39111546 471 0
Stat6 IL-4-hr1GSE17850 39107542 39108114 572 0
hScc1 BcellGSE12603 39105792 39106340 548 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018