AutismKB 2.0

Annotation Detail for TAF4


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:TAF4 ( FLJ41943,TAF2C,TAF2C1,TAF4A,TAFII130,TAFII135 )
Gene Full Name: TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
Band: 20q13.33
Quick LinksEntrez ID:6874; OMIM: 601796; Uniprot ID:TAF4_HUMAN; ENSEMBL ID: ENSG00000130699; HGNC ID: 11537
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
28Phosphoserine(CK1)HMM predict
31Phosphoserine(ATM)HMM predict
47Phosphothreonine(CDC2)HMM predict
47Phosphothreonine(MAPK)HMM predict
66Phosphoserine(CDC2)HMM predict
94MethylarginineHMM predict
104MethylarginineHMM predict
109Phosphoserine(CDC2)HMM predict
109Phosphoserine(CDK)HMM predict
136O-linkedHMM predict
199N-linkedHMM predict
240Phosphothreonine(MAPK)HMM predict
256O-linkedHMM predict
326O-linkedHMM predict
346Phosphoserine(CDC2)HMM predict
360Phosphothreonine(PKC)HMM predict
364O-linkedHMM predict
368O-linkedHMM predict
368O-linkedHMM predict
368Phosphoserine(IKK)HMM predict
385Phosphoserine(MAPK)HMM predict
385O-linkedHMM predict
396Phosphothreonine(MAPK)HMM predict
396Phosphothreonine(CDK)HMM predict
402O-linkedHMM predict
411Phosphoserine(IKK)HMM predict
413O-linkedHMM predict
415Phosphothreonine(MAPK)HMM predict
417O-linkedHMM predict
419O-linkedHMM predict
421O-linkedHMM predict
428Phosphothreonine(MAPK)HMM predict
442N-linkedHMM predict
445N-linkedHMM predict
448N-linkedHMM predict
487O-linkedHMM predict
494Phosphothreonine(MAPK)HMM predict
496O-linkedHMM predict
497O-linkedHMM predict
504O-linkedHMM predict
519Phosphothreonine(MAPK)HMM predict
528Phosphoserine(IKK)HMM predict
533O-linkedHMM predict
539Phosphothreonine(PKC)HMM predict
560O-linkedHMM predict
563O-linkedHMM predict
571Phosphothreonine(MAPK)HMM predict
571Phosphothreonine(CDC2)HMM predict
571Phosphothreonine(CDK)HMM predict
580O-linkedHMM predict
582O-linkedHMM predict
583O-linkedHMM predict
583O-linkedHMM predict
613O-linkedHMM predict
613Phosphoserine(PKG)HMM predict
646N-linkedHMM predict
648Phosphoserine(CDC2)HMM predict
648Phosphoserine(CDK)HMM predict
652Phosphotyrosine(Syk)HMM predict
687Phosphoserine(IKK)HMM predict
687O-linkedHMM predict
687O-linkedHMM predict
690O-linkedHMM predict
691O-linkedHMM predict
700O-linkedHMM predict
709O-linkedHMM predict
714O-linkedHMM predict
715O-linkedHMM predict
715O-linkedHMM predict
759O-linkedHMM predict
761O-linkedHMM predict
934Phosphotyrosine(Syk)HMM predict
934Phosphotyrosine(INSR)HMM predict
934Phosphotyrosine(EGFR)HMM predict
1032Phosphoserine(IKK)HMM predict
1041O-linkedHMM predict
1042O-linkedHMM predict
1051Phosphothreonine(PKC)HMM predict
1056Phosphothreonine(PKA)HMM predict
1069AsparagineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003185
  • Location:chr20 59983249-60074260
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 60074695 60074953 258 564
H3ac HepG2E 60075116 60076450 1334 1523
NFkBII GM12892GSE19485 60073610 60076008 2398 549
NFkBII GM15510GSE19485 60073891 60075161 1270 266
PHF8 HeLaGSE20725 60073576 60075377 1801 216
PHF8 Hs68minusFBSGSE20725 60074349 60075414 1065 621
PHF8 Hs68plusFBSGSE20725 60074050 60075268 1218 399
Pol2 GM12878GSE19551 60074113 60075307 1194 450
PolII HeLaGSE12783 60073303 60075741 2438 262
USF1 HepG2E 60075681 60076981 1300 2071
USF1 HepG2E 60077980 60078245 265 3852
hScc1 BcellGSE12603 60074695 60075681 986 928
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 59967659 59968150 491 15345
hScc1 BcellGSE12603 59973224 59973461 237 9907
hScc1 BcellGSE12603 59973833 59974207 374 9230
hScc1 BcellGSE12603 59975449 59975996 547 7527
hScc1 BcellGSE12603 59978178 59978479 301 4921
hScc1 BcellGSE12603 59979094 59980194 1100 3606
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 60019293 60019551 258 0
CTCF CD4GSE12889 60034584 60034766 182 0
CTCF CD4SISSRdata 60019293 60019551 258 0
CTCF CD4SISSRdata 60034584 60034766 182 0
CTCF G2GSE9613 59986526 59986953 427 0
CTCF G2GSE9613 60012327 60012731 404 0
CTCF G2GSE9613 60019103 60019923 820 0
CTCF G2GSE9613 60029804 60030244 440 0
CTCF G2GSE9613 60066112 60067370 1258 0
CTCF G2GSE9613 60072082 60072829 747 0
H3ac HepG2E 59990140 59991391 1251 0
H3ac HepG2E 60034469 60035733 1264 0
H3ac HepG2E 60038753 60039709 956 0
H3ac HepG2E 60053361 60053834 473 0
H3ac HepG2E 60065283 60067595 2312 0
H3ac HepG2E 60069222 60071906 2684 0
Myc K562GSE19551 60019333 60019762 429 0
TFAP2C MCF7GSE21234 59989428 59989783 355 0
hScc1 BcellGSE12603 59984784 59985266 482 0
hScc1 BcellGSE12603 59990593 59991242 649 0
hScc1 BcellGSE12603 59994370 59994607 237 0
hScc1 BcellGSE12603 59997803 59998166 363 0
hScc1 BcellGSE12603 60007208 60007570 362 0
hScc1 BcellGSE12603 60009789 60010208 419 0
hScc1 BcellGSE12603 60010545 60010914 369 0
hScc1 BcellGSE12603 60012294 60012731 437 0
hScc1 BcellGSE12603 60015069 60015315 246 0
hScc1 BcellGSE12603 60018010 60020374 2364 0
hScc1 BcellGSE12603 60020803 60021113 310 0
hScc1 BcellGSE12603 60024470 60024671 201 0
hScc1 BcellGSE12603 60027574 60028669 1095 0
hScc1 BcellGSE12603 60034469 60035228 759 0
hScc1 BcellGSE12603 60037719 60038051 332 0
hScc1 BcellGSE12603 60054312 60054646 334 0
hScc1 BcellGSE12603 60056822 60058723 1901 0
hScc1 BcellGSE12603 60059488 60062356 2868 0
hScc1 BcellGSE12603 60062920 60063940 1020 0
hScc1 BcellGSE12603 60066190 60066678 488 0
hScc1 BcellGSE12603 60066970 60067370 400 0
hScc1 BcellGSE12603 60072199 60072897 698 0
hScc1 CdLSGSE12603 60019070 60019886 816 0
hScc1 CdLSGSE12603 60034469 60034762 293 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
16627 HTC chr20 59995109 59996854 1745 mRNA TAF4 chr20 59983249 60074261 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved