Annotation Detail for TAF5
Basic Information Top
| Gene Symbol: | TAF5 ( TAF2D,TAFII100 ) |
|---|---|
| Gene Full Name: | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa |
| Band: | 10q24.33 |
| Quick Links | Entrez ID:6877; OMIM: 601787; Uniprot ID:TAF5_HUMAN; ENSEMBL ID: ENSG00000148835; HGNC ID: 11539 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 63 | Phosphothreonine(CDC2) | HMM predict |
| 67 | O-linked | HMM predict |
| 71 | O-linked | HMM predict |
| 154 | Phosphoserine(IKK) | HMM predict |
| 154 | O-linked | HMM predict |
| 166 | O-linked | HMM predict |
| 166 | O-linked | HMM predict |
| 169 | O-linked | HMM predict |
| 172 | O-linked | HMM predict |
| 175 | O-linked | HMM predict |
| 175 | O-linked | HMM predict |
| 177 | O-linked | HMM predict |
| 217 | Sulfotyrosine | HMM predict |
| 218 | Phosphotyrosine(Syk) | HMM predict |
| 274 | Phosphotyrosine(Syk) | HMM predict |
| 275 | Phosphotyrosine(Syk) | HMM predict |
| 294 | N-linked | HMM predict |
| 368 | N-linked | HMM predict |
| 447 | Phosphothreonine(PKC) | HMM predict |
| 500 | Phosphothreonine(CDK) | HMM predict |
| 552 | Phosphoserine(CDC2) | HMM predict |
| 631 | N-linked | HMM predict |
| 678 | Phosphoserine(CDC2) | HMM predict |
- RefSeq ID: NM_006951
- Location:chr10 105117713-105138809
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Myc | K562 | GSE19551 | 105117426 | 105117972 | 546 | 15 |
| TAF | Hela | GSE8489 | 105117521 | 105117685 | 164 | 111 |
| TAF | k562 | GSE8489 | 105117521 | 105117685 | 164 | 111 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 105117265 | 105118837 | 1572 | 0 |
| NFkBII | GM10847 | GSE19485 | 105117074 | 105119048 | 1974 | 0 |
| NFkBII | GM12878 | GSE19485 | 105117114 | 105119049 | 1935 | 0 |
| NFkBII | GM12892 | GSE19485 | 105117075 | 105119046 | 1971 | 0 |
| NFkBII | GM15510 | GSE19485 | 105116909 | 105118901 | 1992 | 0 |
| NFkBII | GM18505 | GSE19485 | 105117011 | 105118940 | 1929 | 0 |
| NFkBII | GM18526 | GSE19485 | 105117002 | 105119053 | 2051 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 105117285 | 105118197 | 912 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 105117304 | 105118143 | 839 | 0 |
| PHF8 | HeLa | GSE20725 | 105117129 | 105118518 | 1389 | 0 |
| Rb | Quiescent | GSE19898 | 105118248 | 105118727 | 479 | 0 |
| Rb | Senescent | GSE19898 | 105118232 | 105118677 | 445 | 0 |
| TAFII | hES | GSE17917 | 105117533 | 105118658 | 1125 | 0 |
| p130 | Quiescent | GSE19898 | 105118203 | 105118655 | 452 | 0 |
| p130 | Senescent | GSE19898 | 105118194 | 105118660 | 466 | 0 |
| p130 | shRbQuiescent | GSE19898 | 105118246 | 105118717 | 471 | 0 |
| p130 | shRbSenescent | GSE19898 | 105117430 | 105118751 | 1321 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3623 | mRNA | TAF5 | chr10 | 105117713 | 105138810 | 70 | EST | chr10 | 105138740 | 105142030 | Sense/Antisense (SA) pairs | |