AutismKB 2.0

Annotation Detail for TAP1


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Basic Information Top
Gene Symbol:TAP1 ( ABC17,ABCB2,APT1,D6S114E,FLJ26666,FLJ41500,PSF1,RING4,TAP1*0102N,TAP1N )
Gene Full Name: transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Band: 6p21.32
Quick LinksEntrez ID:6890; OMIM: 170260; Uniprot ID:TAP1_HUMAN; ENSEMBL ID: ENSG00000168394; HGNC ID: 43
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
124Phosphoserine(IKK)HMM predict
188Phosphoserine(PKA)HMM predict
227N-linkedHMM predict
250N-linkedHMM predict
251N-linkedHMM predict
279N-linkedHMM predict
283N-linkedHMM predict
298Phosphoserine(IKK)HMM predict
300Phosphoserine(CK1)HMM predict
328O-linkedHMM predict
359Phosphoserine(PKG)HMM predict
416Phosphoserine(IKK)HMM predict
495Phosphothreonine(CDK)HMM predict
495Phosphothreonine(MAPK)HMM predict
540N-linkedHMM predict
546Phosphothreonine(PKC)HMM predict
641Phosphoserine(ATM)HMM predict
686Phosphotyrosine(INSR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000593
  • Location:chr6 32920964-32929725
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 32921228 32921484 256 0
CTCF G2GSE9613 32928239 32930557 2318 0
H3K4me3 colorectalcancer 32927912 32928699 787 0
H3ac HepG2E 32927653 32928847 1194 0
NFkBII GM10847GSE19485 32928011 32931323 3312 0
PHF8 Hs68plusFBSGSE20725 32928143 32930795 2652 0
TAF HelaGSE8489 32928447 32928778 331 0
hScc1 BcellGSE12603 32928660 32930084 1424 0
p130 SenescentGSE19898 32929581 32929840 259 0
p130 shRbSenescentGSE19898 32929539 32929844 305 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
22448 EST chr6 32920593 32921859 456 mRNA TAP1 chr6 32920964 32929726Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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