AutismKB 2.0

Annotation Detail for TCF12


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Basic Information Top
Gene Symbol:TCF12 ( HEB,HTF4,HsT17266,bHLHb20 )
Gene Full Name: transcription factor 12
Band: 15q21.3
Quick LinksEntrez ID:6938; OMIM: 600480; Uniprot ID:HTF4_HUMAN; ENSEMBL ID: ENSG00000140262; HGNC ID: 11623
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
279aaTAD.
44Phosphoserine.
47Phosphoserine.
67Phosphoserine.
305Phosphoserine.
313Phosphothreonine.
333Phosphoserine.
557Phosphothreonine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
28Phosphoserine(ATM)HMM predict
39Phosphothreonine(PKA)HMM predict
40Phosphothreonine(PKC)HMM predict
44Phosphoserine(ATM)HMM predict
47Phosphoserine(CK1)HMM predict
57Phosphothreonine(PKC)HMM predict
58O-linkedHMM predict
59Phosphoserine(CAMK2)HMM predict
63O-linkedHMM predict
67O-linkedHMM predict
148Phosphoserine(CDC2)HMM predict
149O-linkedHMM predict
149Phosphoserine(ATM)HMM predict
164Phosphoserine(PKC)HMM predict
193Phosphoserine(ATM)HMM predict
198Phosphoserine(MAPK)HMM predict
213O-linkedHMM predict
213Phosphoserine(CDK)HMM predict
213Phosphoserine(CDC2)HMM predict
233N-linkedHMM predict
245Phosphoserine(ATM)HMM predict
261Phosphoserine(IKK)HMM predict
261Phosphoserine(ATM)HMM predict
281PhosphoserineHMM predict
285O-linkedHMM predict
288N-linkedHMM predict
290O-linkedHMM predict
301O-linkedHMM predict
302Phosphothreonine(PKC)HMM predict
305Phosphoserine(CDC2)HMM predict
305Phosphoserine(CDK)HMM predict
307Phosphotyrosine(Jak)HMM predict
313Phosphothreonine(CDK)HMM predict
313Phosphothreonine(MAPK)HMM predict
317N-linkedHMM predict
333Phosphoserine(ATM)HMM predict
335Phosphothreonine(PKC)HMM predict
352O-linkedHMM predict
354O-linkedHMM predict
358O-linkedHMM predict
358Phosphoserine(IKK)HMM predict
359N-linkedHMM predict
362Phosphothreonine(CDK)HMM predict
362O-linkedHMM predict
366O-linkedHMM predict
366Phosphoserine(CDC2)HMM predict
368Phosphoserine(CDC2)HMM predict
368O-linkedHMM predict
386Phosphoserine(MAPK)HMM predict
386Phosphoserine(ATM)HMM predict
424O-linkedHMM predict
434Phosphoserine(CK1)HMM predict
464Phosphoserine(IKK)HMM predict
464Phosphoserine(PKB)HMM predict
473Phosphoserine(CK1)HMM predict
475Phosphoserine(CK1)HMM predict
475Phosphoserine(IKK)HMM predict
479N-linkedHMM predict
484Phosphoserine(CK1)HMM predict
486O-linkedHMM predict
488O-linkedHMM predict
489O-linkedHMM predict
508Phosphoserine(IKK)HMM predict
508Phosphoserine(ATM)HMM predict
510O-linkedHMM predict
540Phosphoserine(CK2)HMM predict
545Phosphoserine(CK1)HMM predict
545Phosphoserine(ATM)HMM predict
558Phosphoserine(PKG)HMM predict
629Phosphoserine(CK1)HMM predict
658O-linkedHMM predict
663O-linkedHMM predict
673O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003205
  • Location:chr15 54998124-55368003
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 54997691 54998141 450 209
CTCF CD4SISSRdata 54997691 54998141 450 209
CTCF G2GSE9613 54997612 54997967 355 335
H3K4me3 colorectalcancer 54997003 54997260 257 993
Oct1 H2O2-HelaGSE14283 54991380 54991419 39 6725
Oct1 HelaGSE14283 54991380 54991414 34 6728
Oct1 HelaGSE14283 54996600 54996648 48 1501
Oct4 ESGSE20650 54990305 54990535 230 7705
PHF8 Hs68minusFBSGSE20725 54997117 54998421 1304 356
hScc1 BcellGSE12603 54997405 54998099 694 373
p63 keratinocytesGSE17611 54986065 54986987 922 11599
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 55226001 55226176 175 0
CTCF CD4SISSRdata 55226001 55226176 175 0
ER E2-MCF7GSE14664 55242101 55242169 68 0
ER MCF7GSE19013 55149967 55150520 553 0
FOXA1 MCF7GSE15244 55238608 55239083 475 0
FOXA1 eGFPGSE10845 55238608 55239083 475 0
FoxA1 MCF7MACSdata 55058465 55058619 154 0
FoxA1 MCF7MACSdata 55238774 55239131 357 0
H3ac HepG2E 54999325 55000285 960 0
NRSF mAbJurkat 54999325 55000383 1058 0
Oct1 H2O2-HelaGSE14283 55037273 55037306 33 0
Oct1 H2O2-HelaGSE14283 55050260 55050290 30 0
Oct1 H2O2-HelaGSE14283 55050965 55050992 27 0
Oct1 H2O2-HelaGSE14283 55082830 55082858 28 0
Oct1 H2O2-HelaGSE14283 55085595 55085622 27 0
Oct1 H2O2-HelaGSE14283 55115281 55115316 35 0
Oct1 H2O2-HelaGSE14283 55120088 55120120 32 0
Oct1 H2O2-HelaGSE14283 55166626 55166653 27 0
Oct1 H2O2-HelaGSE14283 55183213 55183243 30 0
Oct1 H2O2-HelaGSE14283 55233162 55233216 54 0
Oct1 HelaGSE14283 55008615 55008655 40 0
Oct1 HelaGSE14283 55014617 55014646 29 0
Oct1 HelaGSE14283 55017742 55017772 30 0
Oct1 HelaGSE14283 55037273 55037306 33 0
Oct1 HelaGSE14283 55050252 55050291 39 0
Oct1 HelaGSE14283 55074009 55074038 29 0
Oct1 HelaGSE14283 55082787 55082858 71 0
Oct1 HelaGSE14283 55097245 55097281 36 0
Oct1 HelaGSE14283 55120089 55120120 31 0
Oct1 HelaGSE14283 55135223 55135252 29 0
Oct1 HelaGSE14283 55142884 55142913 29 0
Oct1 HelaGSE14283 55172822 55172855 33 0
Oct1 HelaGSE14283 55225392 55225423 31 0
Oct1 HelaGSE14283 55233167 55233215 48 0
Oct1 HelaGSE14283 55236670 55236696 26 0
Oct1 HelaGSE14283 55242099 55242161 62 0
Oct1 HelaGSE14283 55261274 55261304 30 0
P300 T30-glioblastomaGSE21026 55095286 55095898 612 0
PHF8 HeLaGSE20725 54997468 54999630 2162 0
RNAII Tamoxifen-MCF7GSE14664 55082822 55082896 74 0
TAF HelaGSE8489 54999203 55000493 1290 0
VDR GM10861-stimGSE22484 55209871 55211470 1599 0
hScc1 BcellGSE12603 54998688 54999459 771 0
hScc1 BcellGSE12603 55217880 55218118 238 0
hScc1 BcellGSE12603 55226056 55226376 320 0
hScc1 BcellGSE12603 55293315 55293693 378 0
hScc1 CdLSGSE12603 54997003 54999387 2384 0
hScc1 CdLSGSE12603 55225948 55226628 680 0
hScc1 CdLSGSE12603 55293099 55293768 669 0
p130 QuiescentGSE19898 55111220 55111430 210 0
p63 keratinocytesGSE17611 55146936 55147491 555 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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