AutismKB 2.0

Annotation Detail for TCF20


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Basic Information Top
Gene Symbol:TCF20 ( AR1,KIAA0292,SPBP )
Gene Full Name: transcription factor 20 (AR1)
Band: 22q13.2
Quick LinksEntrez ID:6942; OMIM: 603107; Uniprot ID:TCF20_HUMAN; ENSEMBL ID: ENSG00000100207; HGNC ID: 11631
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
31Phosphoserine.
419Phosphoserine.
430Phosphoserine.
505Phosphoserine.
538Phosphoserine.
548Phosphotyrosine.
559Phosphoserine.
574Phosphoserine.
583Phosphoserine.
627Phosphoserine.
635Phosphothreonine.
640Phosphoserine.
871Phosphoserine.
1005Phosphoserine.
1122Phosphoserine.
1268Nuclear localization signal (By
1335Phosphoserine.
1361Phosphoserine.
1522Phosphoserine.
1600Nuclear localization signal (By
1669Phosphoserine.
1671Phosphothreonine.
1792Nuclear localization signal (By
Location(AA) Modifications Resource
538Phosphoserine.Swiss-Prot 53.0
538PhosphoserinePhospho.ELM 6.0
548Phosphotyrosine.Swiss-Prot 53.0
559Phosphoserine.Swiss-Prot 53.0
559PhosphoserinePhospho.ELM 6.0
574PhosphoserinePhospho.ELM 6.0
574Phosphoserine.Swiss-Prot 53.0
583Phosphoserine.Swiss-Prot 53.0
583PhosphoserinePhospho.ELM 6.0
1005PhosphoserinePhospho.ELM 6.0
1005Phosphoserine.Swiss-Prot 53.0
1122PhosphoserinePhospho.ELM 6.0
1122Phosphoserine.Swiss-Prot 53.0
1671PhosphothreoninePhospho.ELM 6.0
1671Phosphothreonine.Swiss-Prot 53.0
Location(AA) Modification Resource
17Phosphotyrosine(EGFR)HMM predict
47O-linkedHMM predict
60MethylarginineHMM predict
74Phosphoserine(CK1)HMM predict
79Phosphotyrosine(Syk)HMM predict
103Phosphothreonine(CDC2)HMM predict
112O-linkedHMM predict
112Phosphoserine(PKA)HMM predict
112Phosphoserine(PKG)HMM predict
112Phosphoserine(PKB)HMM predict
156Phosphotyrosine(Syk)HMM predict
161Phosphoserine(CDC2)HMM predict
203O-linkedHMM predict
204O-linkedHMM predict
204Phosphoserine(CK1)HMM predict
215O-linkedHMM predict
216Phosphothreonine(PKC)HMM predict
246Phosphoserine(IKK)HMM predict
249Phosphoserine(CDC2)HMM predict
284Phosphotyrosine(Abl)HMM predict
289N-linkedHMM predict
325Phosphoserine(ATM)HMM predict
347Phosphotyrosine(Abl)HMM predict
363N-linkedHMM predict
369N-linkedHMM predict
371O-linkedHMM predict
375O-linkedHMM predict
381O-linkedHMM predict
381Phosphoserine(IKK)HMM predict
383O-linkedHMM predict
384Phosphoserine(CK1)HMM predict
384Phosphoserine(IKK)HMM predict
385Phosphothreonine(MAPK)HMM predict
385Phosphothreonine(CDK)HMM predict
387O-linkedHMM predict
387Phosphoserine(CDC2)HMM predict
387Phosphoserine(MAPK)HMM predict
419PhosphoserineHMM predict
421O-linkedHMM predict
427Phosphoserine(ATM)HMM predict
449Phosphothreonine(PKA)HMM predict
480Phosphothreonine(CDC2)HMM predict
480Phosphothreonine(MAPK)HMM predict
485Phosphothreonine(PKC)HMM predict
490PhosphoserineHMM predict
491Phosphoserine(CDC2)HMM predict
491Phosphoserine(CDK)HMM predict
497Phosphoserine(IKK)HMM predict
504O-linkedHMM predict
504Phosphoserine(CK2)HMM predict
505Phosphoserine(CK2)HMM predict
505Phosphoserine(ATM)HMM predict
526Phosphoserine(CK2)HMM predict
542O-linkedHMM predict
543Phosphoserine(IKK)HMM predict
544Phosphoserine(CK1)HMM predict
546O-linkedHMM predict
547O-linkedHMM predict
558Phosphoserine(CK1)HMM predict
559O-linkedHMM predict
574Phosphoserine(CDC2)HMM predict
574PhosphoserineHMM predict
583Phosphoserine(CDC2)HMM predict
583Phosphoserine(MAPK)HMM predict
627Phosphoserine(CK2)HMM predict
627Phosphoserine(ATM)HMM predict
635Phosphothreonine(PKC)HMM predict
671N-linkedHMM predict
672N-linkedHMM predict
674N-linkedHMM predict
676N-linkedHMM predict
699O-linkedHMM predict
699O-linkedHMM predict
701Phosphoserine(CDC2)HMM predict
720N-linkedHMM predict
769Phosphoserine(PKG)HMM predict
769Phosphoserine(CK1)HMM predict
825Phosphoserine(PKG)HMM predict
825Phosphoserine(CK1)HMM predict
825Phosphoserine(IKK)HMM predict
835N-linkedHMM predict
901N-linkedHMM predict
905Phosphoserine(ATM)HMM predict
938Phosphoserine(ATM)HMM predict
938Phosphoserine(IKK)HMM predict
966Phosphoserine(CDC2)HMM predict
976Phosphoserine(CK1)HMM predict
978Phosphotyrosine(INSR)HMM predict
986Phosphothreonine(CDC2)HMM predict
986Phosphothreonine(MAPK)HMM predict
986Phosphothreonine(CDK)HMM predict
998MethylarginineHMM predict
1002MethylarginineHMM predict
1007Phosphoserine(ATM)HMM predict
1009Phosphotyrosine(Syk)HMM predict
1019Phosphoserine(CDC2)HMM predict
1019PhosphoserineHMM predict
1044N-linkedHMM predict
1047Phosphoserine(CK1)HMM predict
1050Phosphothreonine(CDK)HMM predict
1097Phosphotyrosine(Syk)HMM predict
1097SulfotyrosineHMM predict
1134Phosphoserine(CDC2)HMM predict
1134Phosphoserine(CDK)HMM predict
1196Phosphoserine(CAMK2)HMM predict
1196Phosphoserine(CDC2)HMM predict
1196Phosphoserine(CDK)HMM predict
1196Phosphoserine(IKK)HMM predict
1196Phosphoserine(PKB)HMM predict
1196PhosphoserineHMM predict
1200O-linkedHMM predict
1246Phosphoserine(CK1)HMM predict
1247Phosphoserine(ATM)HMM predict
1262Phosphoserine(CDC2)HMM predict
1270Phosphoserine(PKA)HMM predict
1275N-linkedHMM predict
1276Phosphoserine(PKG)HMM predict
1305Phosphoserine(ATM)HMM predict
1322Phosphoserine(MAPK)HMM predict
1335Phosphoserine(CDC2)HMM predict
1335Phosphoserine(CDK)HMM predict
1387Phosphoserine(CK1)HMM predict
1418Phosphoserine(IKK)HMM predict
1434Phosphoserine(CK1)HMM predict
1466O-linkedHMM predict
1467O-linkedHMM predict
1469Phosphoserine(ATM)HMM predict
1482O-linkedHMM predict
1516N-linkedHMM predict
1598Phosphothreonine(PKA)HMM predict
1598Phosphothreonine(PKC)HMM predict
1628N-linkedHMM predict
1669O-linkedHMM predict
1671Phosphothreonine(MAPK)HMM predict
1671Phosphothreonine(CDK)HMM predict
1676O-linkedHMM predict
1679Phosphoserine(IKK)HMM predict
1705S-palmitoylHMM predict
1706S-palmitoylHMM predict
1729Phosphotyrosine(Syk)HMM predict
1743Phosphothreonine(PKA)HMM predict
1758N-linkedHMM predict
1764Phosphothreonine(CK2)HMM predict
1813Phosphothreonine(PKC)HMM predict
1832O-linkedHMM predict
1896Phosphothreonine(PKC)HMM predict
1945N-linkedHMM predict
1951Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_181492
  • Location:chr22 40885962-40941388
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog ESGSE20650 40943757 40944375 618 2678
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 40876929 40877159 230 8919
hScc1 BcellGSE12603 40878598 40879035 437 7146
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 40894958 40895237 279 0
CTCF CD4SISSRdata 40894958 40895237 279 0
CTCF JurkatGSE12889 40894951 40895232 281 0
CTCF G2GSE9613 40894525 40895348 823 0
ER Breast-CancerGSE22609 40899268 40900008 740 0
ER MCF7GSE19013 40899490 40899891 401 0
FOXA1 MCF7GSE15244 40920275 40920631 356 0
NFkBII GM12878GSE19485 40902883 40904559 1676 0
NFkBII GM12878GSE19485 40908964 40910283 1319 0
Oct4 hESGSE17917 40894951 40895370 419 0
hScc1 BcellGSE12603 40894320 40895384 1064 0
hScc1 CdLSGSE12603 40894608 40895424 816 0
hScc1 G2GSE9613 40894608 40895384 776 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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