AutismKB 2.0

Annotation Detail for TEF


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Basic Information Top
Gene Symbol:TEF ( KIAA1655 )
Gene Full Name: thyrotrophic embryonic factor
Band: 22q13.2
Quick LinksEntrez ID:7008; OMIM: 188595; Uniprot ID:TEF_HUMAN; ENSEMBL ID: ENSG00000167074; HGNC ID: 11722
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
24MethylarginineHMM predict
71O-linkedHMM predict
75Phosphoserine(PKG)HMM predict
98SulfotyrosineHMM predict
133Phosphoserine(PKG)HMM predict
135O-linkedHMM predict
135Phosphoserine(CK2)HMM predict
136O-linkedHMM predict
136Phosphoserine(CK2)HMM predict
136O-linkedHMM predict
136Phosphoserine(CK1)HMM predict
136O-linkedHMM predict
137O-linkedHMM predict
137Phosphoserine(IKK)HMM predict
138O-linkedHMM predict
138O-linkedHMM predict
140Phosphoserine(CDC2)HMM predict
140Phosphoserine(MAPK)HMM predict
140Phosphoserine(IKK)HMM predict
140Phosphoserine(ATM)HMM predict
140O-linkedHMM predict
144O-linkedHMM predict
145O-linkedHMM predict
146O-linkedHMM predict
152O-linkedHMM predict
154O-linkedHMM predict
156Phosphoserine(IKK)HMM predict
170Phosphoserine(CDC2)HMM predict
238Phosphothreonine(PKC)HMM predict
289S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003216
  • Location:chr22 40107908-40125273
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Breast-CancerGSE22609 40106817 40107316 499 842
Rb QuiescentGSE19898 40107193 40107515 322 555
USF1 HepG2E 40106419 40107108 689 1145
USF2 HepG2E 40106419 40107108 689 1145
hScc1 BcellGSE12603 40107042 40107922 880 427
p130 QuiescentGSE19898 40106874 40107766 892 589
p130 SenescentGSE19898 40106806 40107837 1031 587
p130 shRbQuiescentGSE19898 40107000 40107807 807 505
p130 shRbSenescentGSE19898 40106778 40107692 914 674
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 40129791 40130053 262 4649
CTCF CD4SISSRdata 40129791 40130053 262 4649
CTCF HelaGSE12889 40129810 40130128 318 4696
CTCF G2GSE9613 40129664 40129979 315 4548
Fos K562GSE19551 40129752 40130071 319 4638
H3ac HepG2E 40140166 40140992 826 15306
H3ac HepG2E 40141336 40141711 375 16250
Myc K562GSE19551 40129724 40130091 367 4634
NFkBII GM15510GSE19485 40139072 40140678 1606 14602
Rb GrowingGSE19898 40140109 40140306 197 14934
TFAP2C MCF7GSE21234 40127786 40128522 736 2881
TFAP2C MCF7GSE21234 40129598 40130342 744 4697
VDR GM10861-UnstimGSE22484 40138192 40141180 2988 14413
VDR GM10861-stimGSE22484 40138252 40141182 2930 14444
hScc1 BcellGSE12603 40129664 40130189 525 4653
hScc1 BcellGSE12603 40139615 40140482 867 14775
hScc1 BcellGSE12603 40141607 40141822 215 16441
hScc1 CdLSGSE12603 40129664 40130189 525 4653
p130 SenescentGSE19898 40140680 40140916 236 15525
p130 shRbQuiescentGSE19898 40140013 40140410 397 14938
p130 shRbSenescentGSE19898 40139458 40139781 323 14346
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 40123277 40123470 193 0
H3ac HepG2E 40122956 40124962 2006 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-125b hsa-mir-125b-1 11 21347262
hsa-miR-125b hsa-mir-125b-2 21 21347262
No data
Cis-Nats regulation Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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