Annotation Detail for TGFB1

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	TGFB1 ( CED,DPD1,LAP,TGFB,TGFbeta )
Gene Full Name:	transforming growth factor, beta 1
Band:	19q13.1
Quick Links	Entrez ID:7040; OMIM: 190180; Uniprot ID:TGFB1_HUMAN; ENSEMBL ID: ENSG00000105329; HGNC ID: 11766
Relate to Another Database:	SFARIGene; denovo-db

General

Expression

Regulation

Pathways, Diseases and Drugs

PTM

TF binding site

miRNA targets

Cis-NATs

Post Translation Modification

Top

PTM Sites from Uniprot:4 results
Experimental PTM Sites from dbPTM:3 results
Predicted PTM Sites by profile HMM from dbPTM:12 results

Location(AA)	Modification
82	N-linked (GlcNAc...).
136	N-linked (GlcNAc...) (By similarity).
176	N-linked (GlcNAc...) (By similarity).
246	Cell attachment site (Potential).

Location(AA)	Modifications	Resource
82	N-linked (GlcNAc...).	Swiss-Prot 53.0
136	N-linked (GlcNAc...) (By similarity).	Swiss-Prot 53.0
176	N-linked (GlcNAc...) (By similarity).	Swiss-Prot 53.0

Location(AA)	Modification	Resource
61	Phosphoserine(MAPK)	HMM predict
61	Phosphoserine(IKK)	HMM predict
61	Phosphoserine(CAMK2)	HMM predict
64	Phosphoserine(ATM)	HMM predict
82	N-linked	HMM predict
103	Sulfotyrosine	HMM predict
121	Phosphotyrosine(EGFR)	HMM predict
136	N-linked	HMM predict
176	N-linked	HMM predict
177	N-linked	HMM predict
192	Phosphoserine(ATM)	HMM predict
326	S-palmitoyl	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_000660
Location:chr19 46528490-46551655
strand:-

Upstream the gene:0 results
Downstream the gene:1 results
Inside the gene:17 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
p130	shRbQuiescent	GSE19898	46525713	46526336	623	2466

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	46539455	46539844	389
ER	E2-MCF7	GSE14664	46534522	46534565	43
H3K27me3	colorectal	cancer	46548765	46549086	321
H3K4me3	colorectal	cancer	46548765	46548985	220
H3ac	HepG2	E	46549631	46550290	659
NFkBII	GM10847	GSE19485	46548596	46552343	3747
NFkBII	GM12878	GSE19485	46548500	46549988	1488
NFkBII	GM12892	GSE19485	46548705	46552325	3620
NFkBII	GM18505	GSE19485	46548849	46550642	1793
Pol2	GM12878	GSE19551	46548889	46551830	2941
Rb	Quiescent	GSE19898	46549086	46549246	160
Rb	Senescent	GSE19898	46549005	46549377	372
TFAP2C	MCF7	GSE21234	46548813	46549714	901
VDR	GM10861-stim	GSE22484	46548662	46552456	3794
hScc1	Bcell	GSE12603	46539455	46539667	212
hScc1	Bcell	GSE12603	46550139	46550631	492
hScc1	CdLS	GSE12603	46549344	46550526	1182

Validated miRNA targets

Top

miR Walk:402 results
Tarbase V5.0:1 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7a	hsa-let-7a-1	9	21368581
hsa-let-7a	hsa-let-7a-2	11	21368581
hsa-let-7a	hsa-let-7a-3	22	21368581
hsa-let-7a	hsa-let-7a-1	9	20639536
hsa-let-7a	hsa-let-7a-2	11	20639536
hsa-let-7a	hsa-let-7a-3	22	20639536
hsa-let-7a	hsa-let-7a-1	9	21368581
hsa-let-7a	hsa-let-7a-2	11	21368581
hsa-let-7a	hsa-let-7a-3	22	21368581
hsa-let-7a	hsa-let-7a-1	9	20639536
hsa-let-7a	hsa-let-7a-2	11	20639536
hsa-let-7a	hsa-let-7a-3	22	20639536
hsa-let-7a*	hsa-let-7a-1	9	20639536
hsa-let-7a*	hsa-let-7a-3	22	20639536
hsa-let-7a*	hsa-let-7a-1	9	20639536
hsa-let-7a*	hsa-let-7a-3	22	20639536
hsa-let-7b	hsa-let-7b	22	20639536
hsa-let-7b	hsa-let-7b	22	20639536
hsa-let-7b*	hsa-let-7b	22	20639536
hsa-let-7b*	hsa-let-7b	22	20639536
hsa-let-7c	hsa-let-7c	21	20639536
hsa-let-7c	hsa-let-7c	21	20639536
hsa-let-7c*	hsa-let-7c	21	20639536
hsa-let-7c*	hsa-let-7c	21	20639536
hsa-let-7d	hsa-let-7d	9	20639536
hsa-let-7d	hsa-let-7d	9	20639536
hsa-let-7d*	hsa-let-7d	9	20639536
hsa-let-7d*	hsa-let-7d	9	20639536
hsa-let-7e	hsa-let-7e	19	20639536
hsa-let-7e	hsa-let-7e	19	20639536
hsa-let-7e*	hsa-let-7e	19	20639536
hsa-let-7e*	hsa-let-7e	19	20639536
hsa-let-7f	hsa-let-7f-1	9	20639536
hsa-let-7f	hsa-let-7f-2	X	20639536
hsa-let-7f	hsa-let-7f-1	9	20639536
hsa-let-7f	hsa-let-7f-2	X	20639536
hsa-let-7f-1*	hsa-let-7f-1	9	20639536
hsa-let-7f-1*	hsa-let-7f-1	9	20639536
hsa-let-7f-2*	hsa-let-7f-2	X	20639536
hsa-let-7f-2*	hsa-let-7f-2	X	20639536
hsa-let-7g	hsa-let-7g	3	20639536
hsa-let-7g	hsa-let-7g	3	20639536
hsa-let-7g*	hsa-let-7g	3	20639536
hsa-let-7g*	hsa-let-7g	3	20639536
hsa-let-7i	hsa-let-7i	12	20639536
hsa-let-7i	hsa-let-7i	12	20639536
hsa-let-7i*	hsa-let-7i	12	20639536
hsa-let-7i*	hsa-let-7i	12	20639536
hsa-miR-101	hsa-mir-101-1	1	20676061
hsa-miR-101	hsa-mir-101-2	9	20676061
hsa-miR-101	hsa-mir-101-1	1	20676061
hsa-miR-101	hsa-mir-101-2	9	20676061
hsa-miR-106b	hsa-mir-106b	7	18328430
hsa-miR-106b	hsa-mir-106b	7	18328430
hsa-miR-106b*	hsa-mir-106b	7	18328430
hsa-miR-106b*	hsa-mir-106b	7	18328430
hsa-miR-10a	hsa-mir-10a	17	19582816
hsa-miR-10a	hsa-mir-10a	17	19582816
hsa-miR-10a*	hsa-mir-10a	17	19582816
hsa-miR-10a*	hsa-mir-10a	17	19582816
hsa-miR-128	hsa-mir-128-1	2	20054641
hsa-miR-128	hsa-mir-128-1	2	20054641
hsa-miR-130a	hsa-mir-130a	11	21067317
hsa-miR-130a	hsa-mir-130a	11	21067317
hsa-miR-130a*	hsa-mir-130a	11	21067317
hsa-miR-130a*	hsa-mir-130a	11	21067317
hsa-miR-130b	hsa-mir-130b	22	20676061
hsa-miR-130b	hsa-mir-130b	22	20676061
hsa-miR-130b*	hsa-mir-130b	22	20676061
hsa-miR-130b*	hsa-mir-130b	22	20676061
hsa-miR-132	hsa-mir-132	17	20949564
hsa-miR-132	hsa-mir-132	17	20949564
hsa-miR-132*	hsa-mir-132	17	20949564
hsa-miR-132*	hsa-mir-132	17	20949564
hsa-miR-133a	hsa-mir-133a-1	18	19398468
hsa-miR-133a	hsa-mir-133a-2	20	19398468
hsa-miR-133a	hsa-mir-133a-1	18	19398468
hsa-miR-133a	hsa-mir-133a-2	20	19398468
hsa-miR-133b	hsa-mir-133b	6	19398468
hsa-miR-133b	hsa-mir-133b	6	19398468
hsa-miR-135a	hsa-mir-135a-1	3	21063788
hsa-miR-135a	hsa-mir-135a-2	12	21063788
hsa-miR-135a	hsa-mir-135a-1	3	21063788
hsa-miR-135a	hsa-mir-135a-2	12	21063788
hsa-miR-140-3p	hsa-mir-140	16	20676061
hsa-miR-140-3p	hsa-mir-140	16	20071455
hsa-miR-140-3p	hsa-mir-140	16	20676061
hsa-miR-140-3p	hsa-mir-140	16	20071455
hsa-miR-140-5p	hsa-mir-140	16	21063788
hsa-miR-140-5p	hsa-mir-140	16	20071455
hsa-miR-140-5p	hsa-mir-140	16	21063788
hsa-miR-140-5p	hsa-mir-140	16	20071455
hsa-miR-141	hsa-mir-141	12	18698484
hsa-miR-141	hsa-mir-141	12	18698484
hsa-miR-141*	hsa-mir-141	12	18698484
hsa-miR-141*	hsa-mir-141	12	18698484
hsa-miR-146a	hsa-mir-146a	5	20577838
hsa-miR-146a	hsa-mir-146a	5	20577838
hsa-miR-146a*	hsa-mir-146a	5	20577838
hsa-miR-146a*	hsa-mir-146a	5	20577838
hsa-miR-155	hsa-mir-155	21	21125666
hsa-miR-155	hsa-mir-155	21	21038317
hsa-miR-155	hsa-mir-155	21	21036908
hsa-miR-155	hsa-mir-155	21	21125666
hsa-miR-155	hsa-mir-155	21	21038317
hsa-miR-155	hsa-mir-155	21	21036908
hsa-miR-155*	hsa-mir-155	21	21125666
hsa-miR-155*	hsa-mir-155	21	21038317
hsa-miR-155*	hsa-mir-155	21	21036908
hsa-miR-155*	hsa-mir-155	21	21125666
hsa-miR-155*	hsa-mir-155	21	21038317
hsa-miR-155*	hsa-mir-155	21	21036908
hsa-miR-17	hsa-mir-17	13	21067317
hsa-miR-17	hsa-mir-17	13	20940405
hsa-miR-17	hsa-mir-17	13	20639536
hsa-miR-17	hsa-mir-17	13	18922889
hsa-miR-17	hsa-mir-17	13	21067317
hsa-miR-17	hsa-mir-17	13	20940405
hsa-miR-17	hsa-mir-17	13	20639536
hsa-miR-17	hsa-mir-17	13	18922889
hsa-miR-17*	hsa-mir-17	13	21067317
hsa-miR-17*	hsa-mir-17	13	20940405
hsa-miR-17*	hsa-mir-17	13	20639536
hsa-miR-17*	hsa-mir-17	13	18922889
hsa-miR-17*	hsa-mir-17	13	21067317
hsa-miR-17*	hsa-mir-17	13	20940405
hsa-miR-17*	hsa-mir-17	13	20639536
hsa-miR-17*	hsa-mir-17	13	18922889
hsa-miR-181a	hsa-mir-181a-2	9	21368581
hsa-miR-181a	hsa-mir-181a-1	1	21368581
hsa-miR-181a	hsa-mir-181a-2	9	20023698
hsa-miR-181a	hsa-mir-181a-1	1	20023698
hsa-miR-181a	hsa-mir-181a-2	9	21368581
hsa-miR-181a	hsa-mir-181a-1	1	21368581
hsa-miR-181a	hsa-mir-181a-2	9	20023698
hsa-miR-181a	hsa-mir-181a-1	1	20023698
hsa-miR-181a*	hsa-mir-181a-1	1	20023698
hsa-miR-181a*	hsa-mir-181a-1	1	20023698
hsa-miR-181a-2*	hsa-mir-181a-2	9	20023698
hsa-miR-181a-2*	hsa-mir-181a-2	9	20023698
hsa-miR-181b	hsa-mir-181b-1	1	20023698
hsa-miR-181b	hsa-mir-181b-2	9	20023698
hsa-miR-181b	hsa-mir-181b-1	1	20023698
hsa-miR-181b	hsa-mir-181b-2	9	20023698
hsa-miR-181c	hsa-mir-181c	19	20023698
hsa-miR-181c	hsa-mir-181c	19	20023698
hsa-miR-181c*	hsa-mir-181c	19	20023698
hsa-miR-181c*	hsa-mir-181c	19	20023698
hsa-miR-181d	hsa-mir-181d	19	20023698
hsa-miR-181d	hsa-mir-181d	19	20023698
hsa-miR-192	hsa-mir-192	11	20056746
hsa-miR-192	hsa-mir-192	11	20056746
hsa-miR-192*	hsa-mir-192	11	20056746
hsa-miR-192*	hsa-mir-192	11	20056746
hsa-miR-193a-5p	hsa-mir-193a	17	20949564
hsa-miR-193a-5p	hsa-mir-193a	17	20949564
hsa-miR-200a	hsa-mir-200a	1	18698484
hsa-miR-200a	hsa-mir-200a	1	18698484
hsa-miR-200a*	hsa-mir-200a	1	18698484
hsa-miR-200a*	hsa-mir-200a	1	18698484
hsa-miR-200b	hsa-mir-200b	1	18698484
hsa-miR-200b	hsa-mir-200b	1	18698484
hsa-miR-200b*	hsa-mir-200b	1	18698484
hsa-miR-200b*	hsa-mir-200b	1	18698484
hsa-miR-200c	hsa-mir-200c	12	18698484
hsa-miR-200c	hsa-mir-200c	12	18698484
hsa-miR-200c*	hsa-mir-200c	12	18698484
hsa-miR-200c*	hsa-mir-200c	12	18698484
hsa-miR-203	hsa-mir-203	14	21125666
hsa-miR-203	hsa-mir-203	14	21038317
hsa-miR-203	hsa-mir-203	14	21125666
hsa-miR-203	hsa-mir-203	14	21038317
hsa-miR-205	hsa-mir-205	1	18698484
hsa-miR-205	hsa-mir-205	1	18698484
hsa-miR-20a	hsa-mir-20a	13	20639536
hsa-miR-20a	hsa-mir-20a	13	20639536
hsa-miR-20a*	hsa-mir-20a	13	20639536
hsa-miR-20a*	hsa-mir-20a	13	20639536
hsa-miR-21	hsa-mir-21	17	21078976
hsa-miR-21	hsa-mir-21	17	20498632
hsa-miR-21	hsa-mir-21	17	19816956
hsa-miR-21	hsa-mir-21	17	18932017
hsa-miR-21	hsa-mir-21	17	21078976
hsa-miR-21	hsa-mir-21	17	20498632
hsa-miR-21	hsa-mir-21	17	19816956
hsa-miR-21	hsa-mir-21	17	18932017
hsa-miR-21*	hsa-mir-21	17	21078976
hsa-miR-21*	hsa-mir-21	17	20498632
hsa-miR-21*	hsa-mir-21	17	19816956
hsa-miR-21*	hsa-mir-21	17	18932017
hsa-miR-21*	hsa-mir-21	17	21078976
hsa-miR-21*	hsa-mir-21	17	20498632
hsa-miR-21*	hsa-mir-21	17	19816956
hsa-miR-21*	hsa-mir-21	17	18932017
hsa-miR-224	hsa-mir-224	X	20118412
hsa-miR-224	hsa-mir-224	X	20118412
hsa-miR-23b	hsa-mir-23b	9	21125666
hsa-miR-23b	hsa-mir-23b	9	21038317
hsa-miR-23b	hsa-mir-23b	9	19582816
hsa-miR-23b	hsa-mir-23b	9	21125666
hsa-miR-23b	hsa-mir-23b	9	21038317
hsa-miR-23b	hsa-mir-23b	9	19582816
hsa-miR-23b*	hsa-mir-23b	9	21125666
hsa-miR-23b*	hsa-mir-23b	9	21038317
hsa-miR-23b*	hsa-mir-23b	9	19582816
hsa-miR-23b*	hsa-mir-23b	9	21125666
hsa-miR-23b*	hsa-mir-23b	9	21038317
hsa-miR-23b*	hsa-mir-23b	9	19582816
hsa-miR-24	hsa-mir-24-1	9	20945401
hsa-miR-24	hsa-mir-24-2	19	20945401
hsa-miR-24	hsa-mir-24-1	9	20019669
hsa-miR-24	hsa-mir-24-2	19	20019669
hsa-miR-24	hsa-mir-24-1	9	19582816
hsa-miR-24	hsa-mir-24-2	19	19582816
hsa-miR-24	hsa-mir-24-1	9	20945401
hsa-miR-24	hsa-mir-24-2	19	20945401
hsa-miR-24	hsa-mir-24-1	9	20019669
hsa-miR-24	hsa-mir-24-2	19	20019669
hsa-miR-24	hsa-mir-24-1	9	19582816
hsa-miR-24	hsa-mir-24-2	19	19582816
hsa-miR-24-1*	hsa-mir-24-1	9	20019669
hsa-miR-24-1*	hsa-mir-24-1	9	19582816
hsa-miR-24-1*	hsa-mir-24-1	9	20019669
hsa-miR-24-1*	hsa-mir-24-1	9	19582816
hsa-miR-25	hsa-mir-25	7	18328430
hsa-miR-25	hsa-mir-25	7	18328430
hsa-miR-25*	hsa-mir-25	7	18328430
hsa-miR-25*	hsa-mir-25	7	18328430
hsa-miR-26a	hsa-mir-26a-1	3	19582816
hsa-miR-26a	hsa-mir-26a-2	12	19582816
hsa-miR-26a	hsa-mir-26a-1	3	19582816
hsa-miR-26a	hsa-mir-26a-2	12	19582816
hsa-miR-27b	hsa-mir-27b	9	19582816
hsa-miR-27b	hsa-mir-27b	9	19582816
hsa-miR-27b*	hsa-mir-27b	9	19582816
hsa-miR-27b*	hsa-mir-27b	9	19582816
hsa-miR-29a	hsa-mir-29a	7	21273536
hsa-miR-29a	hsa-mir-29a	7	20201077
hsa-miR-29a	hsa-mir-29a	7	21273536
hsa-miR-29a	hsa-mir-29a	7	20201077
hsa-miR-29a*	hsa-mir-29a	7	21273536
hsa-miR-29a*	hsa-mir-29a	7	20201077
hsa-miR-29a*	hsa-mir-29a	7	21273536
hsa-miR-29a*	hsa-mir-29a	7	20201077
hsa-miR-29b	hsa-mir-29b-1	7	21273536
hsa-miR-29b	hsa-mir-29b-2	1	21273536
hsa-miR-29b	hsa-mir-29b-1	7	20201077
hsa-miR-29b	hsa-mir-29b-2	1	20201077
hsa-miR-29b	hsa-mir-29b-1	7	21273536
hsa-miR-29b	hsa-mir-29b-2	1	21273536
hsa-miR-29b	hsa-mir-29b-1	7	20201077
hsa-miR-29b	hsa-mir-29b-2	1	20201077
hsa-miR-29b-1*	hsa-mir-29b-1	7	21273536
hsa-miR-29b-1*	hsa-mir-29b-1	7	20201077
hsa-miR-29b-1*	hsa-mir-29b-1	7	21273536
hsa-miR-29b-1*	hsa-mir-29b-1	7	20201077
hsa-miR-29b-2*	hsa-mir-29b-2	1	21273536
hsa-miR-29b-2*	hsa-mir-29b-2	1	20201077
hsa-miR-29b-2*	hsa-mir-29b-2	1	21273536
hsa-miR-29b-2*	hsa-mir-29b-2	1	20201077
hsa-miR-29c	hsa-mir-29c	1	21273536
hsa-miR-29c	hsa-mir-29c	1	21125666
hsa-miR-29c	hsa-mir-29c	1	21038317
hsa-miR-29c	hsa-mir-29c	1	20676061
hsa-miR-29c	hsa-mir-29c	1	20201077
hsa-miR-29c	hsa-mir-29c	1	21273536
hsa-miR-29c	hsa-mir-29c	1	21125666
hsa-miR-29c	hsa-mir-29c	1	21038317
hsa-miR-29c	hsa-mir-29c	1	20676061
hsa-miR-29c	hsa-mir-29c	1	20201077
hsa-miR-29c*	hsa-mir-29c	1	21273536
hsa-miR-29c*	hsa-mir-29c	1	21125666
hsa-miR-29c*	hsa-mir-29c	1	21038317
hsa-miR-29c*	hsa-mir-29c	1	20676061
hsa-miR-29c*	hsa-mir-29c	1	20201077
hsa-miR-29c*	hsa-mir-29c	1	21273536
hsa-miR-29c*	hsa-mir-29c	1	21125666
hsa-miR-29c*	hsa-mir-29c	1	21038317
hsa-miR-29c*	hsa-mir-29c	1	20676061
hsa-miR-29c*	hsa-mir-29c	1	20201077
hsa-miR-302a	hsa-mir-302a	4	21266536
hsa-miR-302a	hsa-mir-302a	4	21266536
hsa-miR-302a*	hsa-mir-302a	4	21266536
hsa-miR-302a*	hsa-mir-302a	4	21266536
hsa-miR-302b	hsa-mir-302b	4	21266536
hsa-miR-302b	hsa-mir-302b	4	21266536
hsa-miR-302b*	hsa-mir-302b	4	21266536
hsa-miR-302b*	hsa-mir-302b	4	21266536
hsa-miR-302c	hsa-mir-302c	4	21266536
hsa-miR-302c	hsa-mir-302c	4	21266536
hsa-miR-302c*	hsa-mir-302c	4	21266536
hsa-miR-302c*	hsa-mir-302c	4	21266536
hsa-miR-302d	hsa-mir-302d	4	21266536
hsa-miR-302d	hsa-mir-302d	4	21266536
hsa-miR-302d*	hsa-mir-302d	4	21266536
hsa-miR-302d*	hsa-mir-302d	4	21266536
hsa-miR-302f	hsa-mir-302f	0	21266536
hsa-miR-302f	hsa-mir-302f	0	21266536
hsa-miR-30a	hsa-mir-30a	6	20498632
hsa-miR-30a	hsa-mir-30a	6	19582816
hsa-miR-30a	hsa-mir-30a	6	20498632
hsa-miR-30a	hsa-mir-30a	6	19582816
hsa-miR-30a*	hsa-mir-30a	6	20498632
hsa-miR-30a*	hsa-mir-30a	6	19582816
hsa-miR-30a*	hsa-mir-30a	6	20498632
hsa-miR-30a*	hsa-mir-30a	6	19582816
hsa-miR-30b	hsa-mir-30b	8	20676061
hsa-miR-30b	hsa-mir-30b	8	20498632
hsa-miR-30b	hsa-mir-30b	8	20676061
hsa-miR-30b	hsa-mir-30b	8	20498632
hsa-miR-30b*	hsa-mir-30b	8	20676061
hsa-miR-30b*	hsa-mir-30b	8	20498632
hsa-miR-30b*	hsa-mir-30b	8	20676061
hsa-miR-30b*	hsa-mir-30b	8	20498632
hsa-miR-30c	hsa-mir-30c-2	6	20498632
hsa-miR-30c	hsa-mir-30c-1	1	20498632
hsa-miR-30c	hsa-mir-30c-2	6	20498632
hsa-miR-30c	hsa-mir-30c-1	1	20498632
hsa-miR-30c-1*	hsa-mir-30c-1	1	20498632
hsa-miR-30c-1*	hsa-mir-30c-1	1	20498632
hsa-miR-30c-2*	hsa-mir-30c-2	6	20498632
hsa-miR-30c-2*	hsa-mir-30c-2	6	20498632
hsa-miR-30d	hsa-mir-30d	8	20498632
hsa-miR-30d	hsa-mir-30d	8	20498632
hsa-miR-30d*	hsa-mir-30d	8	20498632
hsa-miR-30d*	hsa-mir-30d	8	20498632
hsa-miR-30e	hsa-mir-30e	1	20498632
hsa-miR-30e	hsa-mir-30e	1	20498632
hsa-miR-30e*	hsa-mir-30e	1	20498632
hsa-miR-30e*	hsa-mir-30e	1	20498632
hsa-miR-369-5p	hsa-mir-369	14	21125666
hsa-miR-369-5p	hsa-mir-369	14	21038317
hsa-miR-369-5p	hsa-mir-369	14	21125666
hsa-miR-369-5p	hsa-mir-369	14	21038317
hsa-miR-370	hsa-mir-370	14	21125666
hsa-miR-370	hsa-mir-370	14	21038317
hsa-miR-370	hsa-mir-370	14	21125666
hsa-miR-370	hsa-mir-370	14	21038317
hsa-miR-382	hsa-mir-382	14	20716515
hsa-miR-382	hsa-mir-382	14	20716515
hsa-miR-422a	hsa-mir-422a	15	20949564
hsa-miR-422a	hsa-mir-422a	15	20949564
hsa-miR-429	hsa-mir-429	1	18698484
hsa-miR-429	hsa-mir-429	1	18698484
hsa-miR-450a	hsa-mir-450a-1	X	21125666
hsa-miR-450a	hsa-mir-450a-2	X	21125666
hsa-miR-450a	hsa-mir-450a-1	X	21038317
hsa-miR-450a	hsa-mir-450a-2	X	21038317
hsa-miR-450a	hsa-mir-450a-1	X	21125666
hsa-miR-450a	hsa-mir-450a-2	X	21125666
hsa-miR-450a	hsa-mir-450a-1	X	21038317
hsa-miR-450a	hsa-mir-450a-2	X	21038317
hsa-miR-542-5p	hsa-mir-542	X	21125666
hsa-miR-542-5p	hsa-mir-542	X	21038317
hsa-miR-542-5p	hsa-mir-542	X	21125666
hsa-miR-542-5p	hsa-mir-542	X	21038317
hsa-miR-582-3p	hsa-mir-582	5	21063788
hsa-miR-582-3p	hsa-mir-582	5	21063788
hsa-miR-582-5p	hsa-mir-582	5	21063788
hsa-miR-582-5p	hsa-mir-582	5	21063788
hsa-miR-590-3p	hsa-mir-590	7	19398468
hsa-miR-590-3p	hsa-mir-590	7	19398468
hsa-miR-590-5p	hsa-mir-590	7	19398468
hsa-miR-590-5p	hsa-mir-590	7	19398468
hsa-miR-663	hsa-mir-663	20	20637737
hsa-miR-663	hsa-mir-663	20	20637737
hsa-miR-92a	hsa-mir-92a-1	13	21067317
hsa-miR-92a	hsa-mir-92a-2	X	21067317
hsa-miR-92a	hsa-mir-92a-1	13	20949564
hsa-miR-92a	hsa-mir-92a-2	X	20949564
hsa-miR-92a	hsa-mir-92a-1	13	20940405
hsa-miR-92a	hsa-mir-92a-2	X	20940405
hsa-miR-92a	hsa-mir-92a-1	13	20639536
hsa-miR-92a	hsa-mir-92a-2	X	20639536
hsa-miR-92a	hsa-mir-92a-1	13	18922889
hsa-miR-92a	hsa-mir-92a-2	X	18922889
hsa-miR-92a	hsa-mir-92a-1	13	21067317
hsa-miR-92a	hsa-mir-92a-2	X	21067317
hsa-miR-92a	hsa-mir-92a-1	13	20949564
hsa-miR-92a	hsa-mir-92a-2	X	20949564
hsa-miR-92a	hsa-mir-92a-1	13	20940405
hsa-miR-92a	hsa-mir-92a-2	X	20940405
hsa-miR-92a	hsa-mir-92a-1	13	20639536
hsa-miR-92a	hsa-mir-92a-2	X	20639536
hsa-miR-92a	hsa-mir-92a-1	13	18922889
hsa-miR-92a	hsa-mir-92a-2	X	18922889
hsa-miR-92a-1*	hsa-mir-92a-1	13	20639536
hsa-miR-92a-1*	hsa-mir-92a-1	13	20639536
hsa-miR-93	hsa-mir-93	7	18328430
hsa-miR-93	hsa-mir-93	7	18328430
hsa-miR-93*	hsa-mir-93	7	18328430
hsa-miR-93*	hsa-mir-93	7	18328430
hsa-miR-938	hsa-mir-938	10	21063788
hsa-miR-938	hsa-mir-938	10	21063788
hsa-miR-96	hsa-mir-96	7	21368581
hsa-miR-96	hsa-mir-96	7	21368581
hsa-miR-96*	hsa-mir-96	7	21368581
hsa-miR-96*	hsa-mir-96	7	21368581
hsa-miR-99b	hsa-mir-99b	19	20949564
hsa-miR-99b	hsa-mir-99b	19	20949564
hsa-miR-99b*	hsa-mir-99b	19	20949564
hsa-miR-99b*	hsa-mir-99b	19	20949564

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
99	mRNA cleavage	TRUE	HSV1-miR-LAT	TGFB1	in vitro reporter gene assay (Luciferase)	16738545
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000105329		n_a	n_a	n_a	"squamous cell, epithelium, leukocyte, lymphocyte, macrophage"	"benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"

Cis-Nats regulation

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Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

AutismKB 2.0

Annotation Detail for TGFB1

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics