AutismKB 2.0

Annotation Detail for TSPO


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Basic Information Top
Gene Symbol:TSPO ( BPBS,BZRP,DBI,IBP,MBR,PBR,PBS,PKBS,PTBR,mDRC,pk18 )
Gene Full Name: translocator protein (18kDa)
Band: 22q13.2
Quick LinksEntrez ID:706; OMIM: 109610; Uniprot ID:TSPOA_HUMAN; ENSEMBL ID: ENSG00000100300; HGNC ID: 1158
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000714
  • Location:chr22 41877478-41889190
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 293TGSE20725 41876831 41877914 1083 106
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 HeLaGSE20725 41876857 41878868 2011 0
Rb SenescentGSE19898 41877688 41877939 251 0
hScc1 BcellGSE12603 41877075 41878256 1181 0
hScc1 BcellGSE12603 41880958 41882047 1089 0
hScc1 BcellGSE12603 41888786 41889096 310 0
hScc1 CdLSGSE12603 41877244 41878256 1012 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-146a hsa-mir-146a 5 20854734
hsa-miR-146a hsa-mir-146a 5 20854734
hsa-miR-146a* hsa-mir-146a 5 20854734
hsa-miR-146a* hsa-mir-146a 5 20854734
hsa-miR-181a hsa-mir-181a-2 9 19595696
hsa-miR-181a hsa-mir-181a-1 1 19595696
hsa-miR-181a hsa-mir-181a-2 9 19595696
hsa-miR-181a hsa-mir-181a-1 1 19595696
hsa-miR-181a* hsa-mir-181a-1 1 19595696
hsa-miR-181a* hsa-mir-181a-1 1 19595696
hsa-miR-181a-2* hsa-mir-181a-2 9 19595696
hsa-miR-181a-2* hsa-mir-181a-2 9 19595696
hsa-miR-181b hsa-mir-181b-1 1 19595696
hsa-miR-181b hsa-mir-181b-2 9 19595696
hsa-miR-181b hsa-mir-181b-1 1 19595696
hsa-miR-181b hsa-mir-181b-2 9 19595696
hsa-miR-181c hsa-mir-181c 19 19595696
hsa-miR-181c hsa-mir-181c 19 19595696
hsa-miR-181c* hsa-mir-181c 19 19595696
hsa-miR-181c* hsa-mir-181c 19 19595696
hsa-miR-181d hsa-mir-181d 19 19595696
hsa-miR-181d hsa-mir-181d 19 19595696
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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