Annotation Detail for CLDN5
Basic Information Top
| Gene Symbol: | CLDN5 ( AWAL,BEC1,CPETRL1,TMVCF ) |
|---|---|
| Gene Full Name: | claudin 5 |
| Band: | 22q11.21 |
| Quick Links | Entrez ID:7122; OMIM: 602101; Uniprot ID:CLD5_HUMAN; ENSEMBL ID: ENSG00000184113; HGNC ID: 2047 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 212 | Phosphotyrosine. | |
| 217 | Phosphotyrosine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 84 | Phosphothreonine(PKC) | HMM predict |
| 106 | O-linked | HMM predict |
| 151 | Phosphoserine(ATM) | HMM predict |
| 155 | Phosphoserine(ATM) | HMM predict |
| 179 | S-palmitoyl | HMM predict |
| 207 | Phosphothreonine(PKA) | HMM predict |
- RefSeq ID: NM_003277
- Location:chr22 17890549-17892859
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Breast-Cancer | GSE22609 | 17895592 | 17896077 | 485 | 2975 |
| RARA | MCF7 | GSE15244 | 17912257 | 17912568 | 311 | 19553 |
| RARG | MCF7 | GSE15244 | 17912216 | 17912568 | 352 | 19533 |
| TFAP2C | MCF7 | GSE21234 | 17911531 | 17912196 | 665 | 19004 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 17889993 | 17890491 | 498 | 308 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 17891134 | 17891704 | 570 | 0 |
| hScc1 | Bcell | GSE12603 | 17890930 | 17893083 | 2153 | 0 |
Validated miRNA targets